Conservation of cofitness between PP_5272 and PP_3260 in Pseudomonas putida KT2440

9 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas putida KT2440 1.0 PP_5272 conserved protein of unknown function 1.0 PP_3260 DNA ligase D 0.20 11
Pseudomonas sp. RS175 0.75 PFR28_04401 hypothetical protein 0.67 PFR28_02106 Multifunctional non-homologous end joining protein LigD low > 88
Pseudomonas fluorescens FW300-N2C3 0.74 AO356_12610 Fe-S oxidoreductase 0.67 AO356_26950 ATP-dependent DNA ligase low > 104
Pseudomonas fluorescens FW300-N1B4 0.73 Pf1N1B4_2142 FIG00954130: hypothetical protein 0.66 Pf1N1B4_4314 ATP-dependent DNA ligase (EC 6.5.1.1) clustered with Ku protein, LigD low > 87
Pseudomonas fluorescens SBW25 0.73 PFLU_RS29390 YkgJ family cysteine cluster protein 0.54 PFLU_RS14185 DNA ligase D low > 109
Pseudomonas fluorescens SBW25-INTG 0.73 PFLU_RS29390 YkgJ family cysteine cluster protein 0.54 PFLU_RS14185 DNA ligase D low > 109
Pseudomonas syringae pv. syringae B728a ΔmexB 0.71 Psyr_0233 Protein of unknown function UPF0153 0.52 Psyr_3245 ATP-dependent DNA ligase LigD phosphoesterase module / ATP-dependent DNA ligase LigD polymerase module low > 86
Pseudomonas simiae WCS417 0.71 PS417_27715 Fe-S oxidoreductase 0.54 PS417_13125 ATP-dependent DNA ligase low > 88
Pseudomonas syringae pv. syringae B728a 0.71 Psyr_0233 Protein of unknown function UPF0153 0.52 Psyr_3245 ATP-dependent DNA ligase LigD phosphoesterase module / ATP-dependent DNA ligase LigD polymerase module low > 86
Cupriavidus basilensis FW507-4G11 0.60 RR42_RS33485 Fe-S oxidoreductase 0.42 RR42_RS37085 ATP-dependent DNA ligase low > 128

Not shown: 1 genomes with orthologs for PP_5272 only; 23 genomes with orthologs for PP_3260 only