Conservation of cofitness between PP_2601 and PP_0572 in Pseudomonas putida KT2440

20 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas putida KT2440 1.0 PP_2601 Transcriptional regulator, IclR family 1.0 PP_0572 peptidoglycan glycosyltransferase 0.23 3
Pseudomonas fluorescens FW300-N2E3 0.75 AO353_06220 IclR family transcriptional regulator 0.21 AO353_15515 penicillin-binding protein 1C low > 101
Variovorax sp. OAS795 0.50 ABID97_RS29345 IclR family transcriptional regulator 0.21 ABID97_RS02470 penicillin-binding protein 1C low > 91
Enterobacter sp. TBS_079 0.21 MPMX20_00234 Transcriptional repressor IclR 0.56 MPMX20_03397 Penicillin-binding protein 1C low > 85
Enterobacter asburiae PDN3 0.20 EX28DRAFT_4327 transcriptional regulator, IclR family 0.56 EX28DRAFT_0124 penicillin-binding protein 1C low > 76
Klebsiella michiganensis M5al 0.20 BWI76_RS01680 transcriptional regulator IclR 0.57 BWI76_RS21105 penicillin-binding protein 1C low > 92
Escherichia coli ECRC62 0.20 BNILDI_06135 iclR glyoxylate bypass operon transcriptional repressor IclR 0.57 BNILDI_12150 pbpC peptidoglycan glycosyltransferase PbpC — —
Escherichia coli Nissle 1917 0.20 ECOLIN_RS23155 glyoxylate bypass operon transcriptional repressor IclR 0.57 ECOLIN_RS14310 peptidoglycan glycosyltransferase PbpC low > 52
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.20 GFF1356 Acetate operon repressor 0.57 GFF2420 Penicillin-insensitive transglycosylase (EC 2.4.2.-) & transpeptidase PBP-1C low > 78
Escherichia coli HS(pFamp)R (ATCC 700891) 0.20 OHPLBJKB_04031 Transcriptional repressor IclR 0.57 OHPLBJKB_01190 Penicillin-binding protein 1C low > 73
Escherichia coli BL21 0.20 ECD_03890 transcriptional repressor 0.57 ECD_02411 penicillin-insensitive murein repair transglycosylase; inactive transpeptidase domain protein low > 60
Escherichia coli ECRC101 0.20 MCAODC_03745 iclR glyoxylate bypass operon transcriptional repressor IclR 0.57 MCAODC_12210 pbpC peptidoglycan glycosyltransferase PbpC — —
Escherichia coli BW25113 0.20 b4018 iclR repressor of aceBA operon (VIMSS) 0.57 b2519 pbpC fused transglycosylase/transpeptidase (NCBI) low > 76
Escherichia coli ECOR38 0.20 HEPCGN_11890 iclR glyoxylate bypass operon transcriptional repressor IclR 0.57 HEPCGN_20820 pbpC peptidoglycan glycosyltransferase PbpC low > 85
Escherichia coli ECRC101 0.20 OKFHMN_13245 iclR glyoxylate bypass operon transcriptional repressor IclR 0.57 OKFHMN_21680 pbpC peptidoglycan glycosyltransferase PbpC — —
Escherichia coli ECRC99 0.20 KEDOAH_14915 iclR glyoxylate bypass operon transcriptional repressor IclR 0.57 KEDOAH_06540 pbpC peptidoglycan glycosyltransferase PbpC — —
Escherichia coli ECOR27 0.20 NOLOHH_05385 iclR glyoxylate bypass operon transcriptional repressor IclR 0.57 NOLOHH_13350 pbpC peptidoglycan glycosyltransferase PbpC low > 57
Escherichia coli ECRC102 0.20 NIAGMN_10995 iclR glyoxylate bypass operon transcriptional repressor IclR 0.57 NIAGMN_19450 pbpC peptidoglycan glycosyltransferase PbpC — —
Escherichia coli ECRC98 0.20 JDDGAC_16870 iclR glyoxylate bypass operon transcriptional repressor IclR 0.57 JDDGAC_25355 pbpC peptidoglycan glycosyltransferase PbpC — —
Escherichia fergusonii Becca 0.20 EFB2_04593 Transcriptional repressor IclR 0.57 EFB2_01371 Penicillin-binding protein 1C low > 86
Parabacteroides merdae CL09T00C40 0.16 HMPREF1078_RS01425 IclR family transcriptional regulator 0.21 HMPREF1078_RS00380 penicillin-binding protein 1C low > 61

Not shown: 15 genomes with orthologs for PP_2601 only; 17 genomes with orthologs for PP_0572 only