Conservation of cofitness between OHPLBJKB_02763 and OHPLBJKB_03400 in Escherichia coli HS(pFamp)R (ATCC 700891)

24 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli HS(pFamp)R (ATCC 700891) 1.0 OHPLBJKB_02763 Ribosomal protein S12 methylthiotransferase accessory factor YcaO 1.0 OHPLBJKB_03400 Sigma factor-binding protein Crl 0.34 8
Escherichia coli BL21 1.00 ECD_00909 ribosomal protein S12 methylthiotransferase accessory factor 1.00 ECD_00235 DNA-binding transcriptional regulator low > 61
Escherichia coli BW25113 1.00 b0905 ycaO orf, hypothetical protein (VIMSS) 1.00 b0240 crl DNA-binding transcriptional regulator (NCBI) low > 76
Escherichia coli ECRC101 1.00 MCAODC_24890 ycaO 30S ribosomal protein S12 methylthiotransferase accessory factor YcaO 1.00 MCAODC_00205 crl sigma factor-binding protein Crl low > 87
Escherichia coli ECRC99 1.00 KEDOAH_22235 ycaO 30S ribosomal protein S12 methylthiotransferase accessory factor YcaO 1.00 KEDOAH_18470 crl sigma factor-binding protein Crl
Escherichia coli ECRC98 1.00 JDDGAC_09110 ycaO 30S ribosomal protein S12 methylthiotransferase accessory factor YcaO 1.00 JDDGAC_13310 crl sigma factor-binding protein Crl low > 86
Escherichia coli ECRC102 1.00 NIAGMN_03220 ycaO 30S ribosomal protein S12 methylthiotransferase accessory factor YcaO 1.00 NIAGMN_07545 crl sigma factor-binding protein Crl
Escherichia coli ECRC100 1.00 OKFHMN_05500 ycaO 30S ribosomal protein S12 methylthiotransferase accessory factor YcaO 1.00 OKFHMN_09685 crl sigma factor-binding protein Crl low > 80
Escherichia coli ECOR27 1.00 NOLOHH_22060 ycaO 30S ribosomal protein S12 methylthiotransferase accessory factor YcaO 1.00 NOLOHH_02060 crl sigma factor-binding protein Crl low > 75
Escherichia coli ECRC62 1.00 BNILDI_20315 ycaO 30S ribosomal protein S12 methylthiotransferase accessory factor YcaO 1.00 BNILDI_00255 crl sigma factor-binding protein Crl low > 75
Escherichia fergusonii Becca 1.00 EFB2_03159 Ribosomal protein S12 methylthiotransferase accessory factor YcaO 0.97 EFB2_03780 Sigma factor-binding protein Crl low > 86
Escherichia coli Nissle 1917 1.00 ECOLIN_RS04795 30S ribosomal protein S12 methylthiotransferase accessory factor YcaO 0.97 ECOLIN_RS01815 sigma factor-binding protein Crl low > 55
Escherichia coli ECOR38 0.99 HEPCGN_23020 ycaO 30S ribosomal protein S12 methylthiotransferase accessory factor YcaO 0.99 HEPCGN_07790 crl sigma factor-binding protein Crl low > 87
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.93 GFF3662 FIG00638589: hypothetical protein 0.88 GFF4111 Curlin genes transcriptional activator low > 78
Enterobacter asburiae PDN3 0.92 EX28DRAFT_2030 YcaO-type kinase domain 0.82 EX28DRAFT_2653 Transcriptional regulator Crl low > 76
Enterobacter sp. TBS_079 0.91 MPMX20_01564 Ribosomal protein S12 methylthiotransferase accessory factor YcaO 0.82 MPMX20_00925 Sigma factor-binding protein Crl low > 85
Klebsiella michiganensis M5al 0.91 BWI76_RS09745 30S ribosomal protein S12 methylthiotransferase accessory protein YcaO 0.79 BWI76_RS05555 Crl family RNA polymerase assembly factor low > 92
Dickeya dianthicola ME23 0.84 DZA65_RS09985 hypothetical protein 0.54 DZA65_RS17700 sigma factor-binding protein Crl low > 75
Dickeya dadantii 3937 0.84 DDA3937_RS09665 30S ribosomal protein S12 methylthiotransferase accessory protein YcaO 0.54 DDA3937_RS16540 sigma factor-binding protein Crl low > 74
Dickeya dianthicola 67-19 0.83 HGI48_RS09675 YcaO-like family protein 0.54 HGI48_RS16610 sigma factor-binding protein Crl low > 71
Pectobacterium carotovorum WPP14 0.82 HER17_RS12295 30S ribosomal protein S12 methylthiotransferase accessory protein YcaO 0.58 HER17_RS04695 sigma factor-binding protein Crl low > 75
Pantoea sp. MT58 0.81 IAI47_12870 30S ribosomal protein S12 methylthiotransferase accessory protein YcaO 0.70 IAI47_15130 sigma factor-binding protein Crl low > 76
Erwinia tracheiphila SCR3 0.81 LU632_RS09785 30S ribosomal protein S12 methylthiotransferase accessory factor YcaO 0.71 LU632_RS01170 crl sigma factor-binding protein Crl low > 74
Rahnella sp. WP5 0.81 EX31_RS18260 30S ribosomal protein S12 methylthiotransferase accessory factor YcaO 0.75 EX31_RS20985 sigma factor-binding protein Crl low > 89
Serratia liquefaciens MT49 0.79 IAI46_08620 YcaO-like family protein 0.74 IAI46_04425 sigma factor-binding protein Crl low > 86

Not shown: 1 genomes with orthologs for OHPLBJKB_02763 only; 0 genomes with orthologs for OHPLBJKB_03400 only