Conservation of cofitness between OHPLBJKB_01568 and OHPLBJKB_00705 in Escherichia coli HS(pFamp)R (ATCC 700891)

20 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli HS(pFamp)R (ATCC 700891) 1.0 OHPLBJKB_01568 Cytidine deaminase 1.0 OHPLBJKB_00705 Hydrogenase-2 large chain 0.39 16
Escherichia coli ECOR27 1.00 NOLOHH_15140 cdd cytidine deaminase 1.00 NOLOHH_10795 hybC hydrogenase 2 large subunit low > 75
Escherichia coli BL21 1.00 ECD_02072 cytidine/deoxycytidine deaminase 1.00 ECD_02870 hydrogenase 2, large subunit low > 61
Escherichia coli BW25113 1.00 b2143 cdd cytidine deaminase (NCBI) 1.00 b2994 hybC hydrogenase 2, large subunit (NCBI) low > 76
Escherichia coli ECOR38 1.00 HEPCGN_22835 cdd cytidine deaminase 1.00 HEPCGN_17880 hybC hydrogenase 2 large subunit low > 87
Escherichia fergusonii Becca 1.00 EFB2_01713 Cytidine deaminase 1.00 EFB2_00813 Hydrogenase-2 large chain 0.35 61
Escherichia coli Nissle 1917 1.00 ECOLIN_RS12545 cytidine deaminase 1.00 ECOLIN_RS17250 hydrogenase 2 large subunit — —
Escherichia coli ECRC62 1.00 BNILDI_14060 cdd cytidine deaminase 1.00 BNILDI_00720 hybC hydrogenase 2 large subunit low > 75
Escherichia coli ECRC101 0.99 MCAODC_14620 cdd cytidine deaminase 1.00 MCAODC_09535 hybC hydrogenase 2 large subunit low > 87
Escherichia coli ECRC102 0.99 NIAGMN_21335 cdd cytidine deaminase 1.00 NIAGMN_16785 hybC hydrogenase 2 large subunit — —
Escherichia coli ECRC99 0.99 KEDOAH_04615 cdd cytidine deaminase 1.00 KEDOAH_09125 hybC hydrogenase 2 large subunit — —
Escherichia coli ECRC100 0.99 OKFHMN_23570 cdd cytidine deaminase 1.00 OKFHMN_19020 hybC hydrogenase 2 large subunit low > 80
Escherichia coli ECRC98 0.99 JDDGAC_27525 cdd cytidine deaminase 1.00 JDDGAC_22655 hybC hydrogenase 2 large subunit low > 86
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.84 GFF3795 Cytidine deaminase (EC 3.5.4.5) 0.95 GFF3105 Uptake hydrogenase large subunit (EC 1.12.99.6) low > 78
Dickeya dadantii 3937 0.48 DDA3937_RS08485 cytidine deaminase 0.78 DDA3937_RS14240 hydrogenase 2 large subunit low > 74
Dickeya dianthicola ME23 0.47 DZA65_RS08940 cytidine deaminase 0.78 DZA65_RS14890 hydrogenase 2 large subunit low > 75
Dickeya dianthicola 67-19 0.47 HGI48_RS08650 cytidine deaminase 0.78 HGI48_RS14215 hydrogenase 2 large subunit low > 71
Shewanella loihica PV-4 0.38 Shew_1610 cytidine deaminase (RefSeq) 0.39 Shew_1764 nickel-dependent hydrogenase, large subunit (RefSeq) low > 60
Shewanella sp. ANA-3 0.37 Shewana3_2573 Cytidine deaminase (EC 3.5.4.5) (from data) 0.42 Shewana3_1879 nickel-dependent hydrogenase, large subunit (RefSeq) low > 73
Shewanella oneidensis MR-1 0.36 SO2791 cdd Cytidine deaminase (EC 3.5.4.5) (from data) 0.42 SO2098 hyaB quinone-reactive Ni/Fe hydrogenase, large subunit (NCBI ptt file) low > 76
Shewanella amazonensis SB2B 0.36 Sama_1974 Cytidine deaminase (EC 3.5.4.5) (from data) 0.42 Sama_1678 hydrogenase large chain (RefSeq) low > 62

Not shown: 9 genomes with orthologs for OHPLBJKB_01568 only; 7 genomes with orthologs for OHPLBJKB_00705 only