Conservation of cofitness between NOLOHH_16895 and NOLOHH_22305 in Escherichia coli ECOR27

20 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli ECOR27 1.0 NOLOHH_16895 exoX exodeoxyribonuclease X 1.0 NOLOHH_22305 rlmC 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC 0.56 13
Escherichia coli Nissle 1917 1.00 ECOLIN_RS10265 exodeoxyribonuclease X 0.99 ECOLIN_RS04575 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC — —
Escherichia coli ECOR38 1.00 HEPCGN_04785 exoX exodeoxyribonuclease X 0.99 HEPCGN_02095 rlmC 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC low > 87
Escherichia coli BW25113 1.00 b1844 exoX exodeoxyribonuclease X (NCBI) 0.99 b0859 rumB 23S rRNA m(5)U747-methyltransferase (NCBI) low > 76
Escherichia fergusonii Becca 1.00 EFB2_02100 Exodeoxyribonuclease 10 0.99 EFB2_03202 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC low > 86
Escherichia coli BL21 1.00 ECD_01815 exodeoxyribonuclease 10; DNA exonuclease X 0.99 ECD_00864 23S rRNA m(5)U747 methyltransferase, SAM-dependent low > 61
Escherichia coli ECRC100 0.99 OKFHMN_26385 exoX exodeoxyribonuclease X 0.98 OKFHMN_05935 rlmC 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC low > 80
Escherichia coli HS(pFamp)R (ATCC 700891) 0.99 OHPLBJKB_01887 Exodeoxyribonuclease 10 0.99 OHPLBJKB_02809 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC low > 73
Escherichia coli ECRC99 0.99 KEDOAH_01720 exoX exodeoxyribonuclease X 0.98 KEDOAH_21975 rlmC 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC — —
Escherichia coli ECRC62 0.99 BNILDI_15690 exoX exodeoxyribonuclease X 0.99 BNILDI_20560 rlmC 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC low > 75
Escherichia coli ECRC102 0.99 NIAGMN_01675 exoX exodeoxyribonuclease X 0.98 NIAGMN_03980 rlmC 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC — —
Escherichia coli ECRC98 0.99 JDDGAC_00960 exoX exodeoxyribonuclease X 0.98 JDDGAC_09570 rlmC 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC low > 86
Escherichia coli ECRC101 0.99 MCAODC_19020 exoX exodeoxyribonuclease X 0.98 MCAODC_25150 rlmC 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC low > 87
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.93 GFF1623 Exodeoxyribonuclease X (EC 3.1.11.-) 0.89 GFF763 23S rRNA (Uracil-5-) -methyltransferase rumB (EC 2.1.1.-) low > 78
Enterobacter sp. TBS_079 0.90 MPMX20_02751 Exodeoxyribonuclease 10 0.87 MPMX20_01500 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC low > 85
Enterobacter asburiae PDN3 0.89 EX28DRAFT_0710 DNA polymerase III, epsilon subunit and related 3'-5' exonucleases 0.87 EX28DRAFT_2094 23S rRNA (uracil-5-)-methyltransferase RumB low > 76
Klebsiella michiganensis M5al 0.88 BWI76_RS18070 DNA polymerase III subunit epsilon 0.81 BWI76_RS09485 23S rRNA (uracil(747)-C(5))-methyltransferase low > 92
Rahnella sp. WP5 0.78 EX31_RS00350 exodeoxyribonuclease X 0.76 EX31_RS09605 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC low > 89
Erwinia tracheiphila SCR3 0.64 LU632_RS13315 exoX exodeoxyribonuclease X 0.66 LU632_RS09660 rlmC 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC low > 74
Pantoea sp. MT58 0.62 IAI47_08520 exodeoxyribonuclease X 0.74 IAI47_13020 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC low > 76
Serratia liquefaciens MT49 0.61 IAI46_09980 exodeoxyribonuclease X 0.77 IAI46_08395 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC low > 86

Not shown: 4 genomes with orthologs for NOLOHH_16895 only; 9 genomes with orthologs for NOLOHH_22305 only