Conservation of cofitness between NOLOHH_16895 and NOLOHH_21740 in Escherichia coli ECOR27

20 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli ECOR27 1.0 NOLOHH_16895 exoX exodeoxyribonuclease X 1.0 NOLOHH_21740 rlmI 23S rRNA (cytosine(1962)-C(5))-methyltransferase RlmI 0.54 19
Escherichia fergusonii Becca 1.00 EFB2_02100 Exodeoxyribonuclease 10 0.99 EFB2_03104 Ribosomal RNA large subunit methyltransferase I low > 86
Escherichia coli Nissle 1917 1.00 ECOLIN_RS10265 exodeoxyribonuclease X 1.00 ECOLIN_RS05085 23S rRNA (cytosine(1962)-C(5))-methyltransferase RlmI — —
Escherichia coli BW25113 1.00 b1844 exoX exodeoxyribonuclease X (NCBI) 1.00 b0967 yccW predicted methyltransferase (RefSeq) low > 76
Escherichia coli ECOR38 1.00 HEPCGN_04785 exoX exodeoxyribonuclease X 1.00 HEPCGN_23335 rlmI 23S rRNA (cytosine(1962)-C(5))-methyltransferase RlmI low > 87
Escherichia coli BL21 1.00 ECD_01815 exodeoxyribonuclease 10; DNA exonuclease X 1.00 ECD_00971 23S rRNA m(5)C1962 methyltransferase, SAM-dependent low > 61
Escherichia coli ECRC100 0.99 OKFHMN_26385 exoX exodeoxyribonuclease X 0.99 OKFHMN_05185 rlmI 23S rRNA (cytosine(1962)-C(5))-methyltransferase RlmI low > 80
Escherichia coli ECRC99 0.99 KEDOAH_01720 exoX exodeoxyribonuclease X 0.99 KEDOAH_22550 rlmI 23S rRNA (cytosine(1962)-C(5))-methyltransferase RlmI — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.99 OHPLBJKB_01887 Exodeoxyribonuclease 10 1.00 OHPLBJKB_02699 Ribosomal RNA large subunit methyltransferase I low > 73
Escherichia coli ECRC102 0.99 NIAGMN_01675 exoX exodeoxyribonuclease X 0.99 NIAGMN_02905 rlmI 23S rRNA (cytosine(1962)-C(5))-methyltransferase RlmI — —
Escherichia coli ECRC62 0.99 BNILDI_15690 exoX exodeoxyribonuclease X 0.99 BNILDI_19905 rlmI 23S rRNA (cytosine(1962)-C(5))-methyltransferase RlmI low > 75
Escherichia coli ECRC98 0.99 JDDGAC_00960 exoX exodeoxyribonuclease X 0.99 JDDGAC_08795 rlmI 23S rRNA (cytosine(1962)-C(5))-methyltransferase RlmI low > 86
Escherichia coli ECRC101 0.99 MCAODC_19020 exoX exodeoxyribonuclease X 0.99 MCAODC_24575 rlmI 23S rRNA (cytosine(1962)-C(5))-methyltransferase RlmI low > 87
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.93 GFF1623 Exodeoxyribonuclease X (EC 3.1.11.-) 0.94 GFF3258 LSU m5C1962 methyltransferase RlmI low > 78
Enterobacter sp. TBS_079 0.90 MPMX20_02751 Exodeoxyribonuclease 10 0.95 MPMX20_01617 Ribosomal RNA large subunit methyltransferase I low > 85
Enterobacter asburiae PDN3 0.89 EX28DRAFT_0710 DNA polymerase III, epsilon subunit and related 3'-5' exonucleases 0.95 EX28DRAFT_1976 Predicted SAM-dependent methyltransferases low > 76
Klebsiella michiganensis M5al 0.88 BWI76_RS18070 DNA polymerase III subunit epsilon 0.91 BWI76_RS10045 23S rRNA (cytosine(1962)-C(5))-methyltransferase low > 92
Rahnella sp. WP5 0.78 EX31_RS00350 exodeoxyribonuclease X 0.82 EX31_RS17990 23S rRNA (cytosine(1962)-C(5))-methyltransferase RlmI low > 89
Erwinia tracheiphila SCR3 0.64 LU632_RS13315 exoX exodeoxyribonuclease X 0.83 LU632_RS10090 rlmI 23S rRNA (cytosine(1962)-C(5))-methyltransferase RlmI low > 74
Pantoea sp. MT58 0.62 IAI47_08520 exodeoxyribonuclease X 0.87 IAI47_12595 23S rRNA (cytosine(1962)-C(5))-methyltransferase RlmI low > 76
Serratia liquefaciens MT49 0.61 IAI46_09980 exodeoxyribonuclease X 0.85 IAI46_08925 23S rRNA (cytosine(1962)-C(5))-methyltransferase RlmI low > 86

Not shown: 4 genomes with orthologs for NOLOHH_16895 only; 61 genomes with orthologs for NOLOHH_21740 only