Conservation of cofitness between NOLOHH_15350 and NOLOHH_21130 in Escherichia coli ECOR27

18 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli ECOR27 1.0 NOLOHH_15350 rcnR Ni(II)/Co(II)-binding transcriptional repressor RcnR 1.0 NOLOHH_21130 yceD 23S rRNA accumulation protein YceD 0.61 13
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_01605 Transcriptional repressor RcnR 0.99 OHPLBJKB_02578 Large ribosomal RNA subunit accumulation protein YceD low > 73
Escherichia coli Nissle 1917 1.00 ECOLIN_RS12345 Ni(II)/Co(II)-binding transcriptional repressor RcnR 1.00 ECOLIN_RS06290 23S rRNA accumulation protein YceD — —
Escherichia coli ECRC62 1.00 BNILDI_14300 rcnR Ni(II)/Co(II)-binding transcriptional repressor RcnR 1.00 BNILDI_19290 yceD 23S rRNA accumulation protein YceD low > 75
Escherichia coli ECRC100 1.00 OKFHMN_24050 rcnR Ni(II)/Co(II)-binding transcriptional repressor RcnR 1.00 OKFHMN_03600 yceD 23S rRNA accumulation protein YceD low > 80
Escherichia coli ECRC98 1.00 JDDGAC_28160 rcnR Ni(II)/Co(II)-binding transcriptional repressor RcnR 1.00 JDDGAC_07260 yceD 23S rRNA accumulation protein YceD — —
Escherichia coli ECRC101 1.00 MCAODC_21110 rcnR Ni(II)/Co(II)-binding transcriptional repressor RcnR 1.00 MCAODC_22960 yceD 23S rRNA accumulation protein YceD low > 87
Escherichia coli BW25113 1.00 b2105 yohL hypothetical protein (NCBI) 1.00 b1088 yceD hypothetical protein (NCBI) low > 76
Escherichia coli ECOR38 1.00 HEPCGN_02750 rcnR Ni(II)/Co(II)-binding transcriptional repressor RcnR 1.00 HEPCGN_23880 yceD 23S rRNA accumulation protein YceD low > 87
Escherichia fergusonii Becca 1.00 EFB2_01751 Transcriptional repressor RcnR 1.00 EFB2_02887 Large ribosomal RNA subunit accumulation protein YceD low > 86
Escherichia coli ECRC102 1.00 NIAGMN_21995 rcnR Ni(II)/Co(II)-binding transcriptional repressor RcnR 1.00 NIAGMN_24230 yceD 23S rRNA accumulation protein YceD — —
Escherichia coli ECRC99 1.00 KEDOAH_04100 rcnR Ni(II)/Co(II)-binding transcriptional repressor RcnR 1.00 KEDOAH_24155 yceD 23S rRNA accumulation protein YceD — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.96 GFF1334 Uncharacterized protein YohL 0.97 GFF3370 COG1399 protein, clustered with ribosomal protein L32p low > 78
Rahnella sp. WP5 0.89 EX31_RS06565 Ni(II)/Co(II)-binding transcriptional repressor RcnR 0.85 EX31_RS24410 23S rRNA accumulation protein YceD low > 89
Enterobacter asburiae PDN3 0.68 EX28DRAFT_2506 Uncharacterized protein conserved in bacteria 0.94 EX28DRAFT_1841 Predicted metal-binding, possibly nucleic acid-binding protein — —
Enterobacter sp. TBS_079 0.65 MPMX20_01054 Transcriptional repressor RcnR 0.94 MPMX20_01768 Large ribosomal RNA subunit accumulation protein YceD low > 85
Klebsiella michiganensis M5al 0.65 BWI76_RS06680 hypothetical protein 0.87 BWI76_RS11065 hypothetical protein — —
Rhodanobacter sp. FW510-T8 0.48 OKGIIK_02205 Metal-sensitive transcriptional repressor 0.15 OKGIIK_05695 Large ribosomal RNA subunit accumulation protein YceD — —
Lysobacter sp. OAE881 0.45 ABIE51_RS11060 metal/formaldehyde-sensitive transcriptional repressor 0.21 ABIE51_RS13965 YceD family protein — —

Not shown: 8 genomes with orthologs for NOLOHH_15350 only; 33 genomes with orthologs for NOLOHH_21130 only