Conservation of cofitness between NOLOHH_20595 and NOLOHH_12655 in Escherichia coli ECOR27

26 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli ECOR27 1.0 NOLOHH_20595 sirB1 invasion regulator SirB1 1.0 NOLOHH_12655 proW glycine betaine/L-proline ABC transporter permease ProW low > 75
Escherichia coli ECRC62 1.00 BNILDI_18750 sirB1 invasion regulator SirB1 1.00 BNILDI_11215 proW glycine betaine/L-proline ABC transporter permease ProW low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_02473 hypothetical protein 0.99 OHPLBJKB_01054 Glycine betaine/proline betaine transport system permease protein ProW low > 73
Escherichia coli ECRC100 1.00 OKFHMN_28465 sirB1 invasion regulator SirB1 1.00 OKFHMN_20815 proW glycine betaine/L-proline ABC transporter permease ProW low > 80
Escherichia coli BL21 1.00 ECD_01189 transglutaminase-like TPR-repeat protein 0.99 ECD_02534 glycine betaine/proline ABC transporter permease 0.51 14
Escherichia coli ECRC101 1.00 MCAODC_21795 sirB1 invasion regulator SirB1 1.00 MCAODC_11340 proW glycine betaine/L-proline ABC transporter permease ProW low > 87
Escherichia coli ECRC99 1.00 KEDOAH_25460 sirB1 invasion regulator SirB1 1.00 KEDOAH_07320 proW glycine betaine/L-proline ABC transporter permease ProW — —
Escherichia coli BW25113 1.00 b1214 ychA predicted transcriptional regulator (NCBI) 0.99 b2678 proW glycine betaine transporter subunit (NCBI) low > 76
Escherichia coli ECOR38 1.00 HEPCGN_24930 sirB1 invasion regulator SirB1 1.00 HEPCGN_20015 proW glycine betaine/L-proline ABC transporter permease ProW 0.56 33
Escherichia coli ECRC98 1.00 JDDGAC_06110 sirB1 invasion regulator SirB1 1.00 JDDGAC_24480 proW glycine betaine/L-proline ABC transporter permease ProW low > 86
Escherichia coli ECRC102 1.00 NIAGMN_27770 sirB1 invasion regulator SirB1 1.00 NIAGMN_18585 proW glycine betaine/L-proline ABC transporter permease ProW — —
Escherichia fergusonii Becca 1.00 EFB2_02713 hypothetical protein 1.00 EFB2_01249 Glycine betaine/proline betaine transport system permease protein ProW low > 86
Escherichia coli Nissle 1917 0.99 ECOLIN_RS07335 invasion regulator SirB1 0.99 ECOLIN_RS14935 glycine betaine/L-proline ABC transporter permease ProW low > 55
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.86 GFF2771 FIG002708: Protein SirB1 0.90 GFF1588 L-proline glycine betaine ABC transport system permease protein ProW (TC 3.A.1.12.1) low > 78
Enterobacter asburiae PDN3 0.82 EX28DRAFT_0833 Uncharacterized conserved protein 0.87 EX28DRAFT_2764 ABC-type proline/glycine betaine transport system, permease component low > 76
Enterobacter sp. TBS_079 0.82 MPMX20_02633 hypothetical protein 0.87 MPMX20_03559 Glycine betaine/proline betaine transport system permease protein ProW low > 85
Klebsiella michiganensis M5al 0.78 BWI76_RS17420 hypothetical protein 0.86 BWI76_RS22070 proline/betaine ABC transporter permease ProW low > 92
Pectobacterium carotovorum WPP14 0.68 HER17_RS10495 invasion regulator SirB1 0.81 HER17_RS04500 glycine betaine/L-proline ABC transporter permease ProW low > 75
Dickeya dadantii 3937 0.67 DDA3937_RS10980 tetratricopeptide repeat-containing protein 0.81 DDA3937_RS16725 glycine betaine/L-proline ABC transporter permease ProW low > 74
Dickeya dianthicola 67-19 0.67 HGI48_RS10930 tetratricopeptide repeat-containing protein 0.79 HGI48_RS16805 glycine betaine/L-proline ABC transporter permease ProW — —
Dickeya dianthicola ME23 0.67 DZA65_RS11390 tetratricopeptide repeat-containing protein 0.79 DZA65_RS17880 glycine betaine/L-proline ABC transporter permease ProW low > 75
Pantoea sp. MT58 0.65 IAI47_11255 tetratricopeptide repeat-containing protein 0.82 IAI47_04520 glycine betaine/L-proline ABC transporter permease ProW — —
Serratia liquefaciens MT49 0.64 IAI46_10295 tetratricopeptide repeat-containing protein 0.79 IAI46_19955 glycine betaine/L-proline ABC transporter permease ProW low > 86
Rahnella sp. WP5 0.63 EX31_RS07300 tetratricopeptide repeat-containing protein 0.76 EX31_RS13615 glycine betaine/L-proline ABC transporter permease ProW low > 89
Erwinia tracheiphila SCR3 0.60 LU632_RS10745 sirB1 invasion regulator SirB1 0.76 LU632_RS16825 proW glycine betaine/L-proline ABC transporter permease ProW low > 74
Variovorax sp. SCN45 0.13 GFF3931 Protein sirB1 0.56 GFF481 Glycine betaine/L-proline transport system permease protein ProW (TC 3.A.1.12.1) low > 127
Hydrogenophaga sp. GW460-11-11-14-LB1 0.13 GFF3424 Protein sirB1 0.55 GFF4104 L-proline glycine betaine ABC transport system permease protein ProW (TC 3.A.1.12.1) low > 90

Not shown: 20 genomes with orthologs for NOLOHH_20595 only; 5 genomes with orthologs for NOLOHH_12655 only