Conservation of cofitness between JDDGAC_28305 and JDDGAC_26565 in Escherichia coli ECRC98

24 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli ECRC98 1.0 JDDGAC_28305 mdtB multidrug efflux RND transporter permease subunit MdtB 1.0 JDDGAC_26565 smrB endonuclease SmrB 0.79 3
Escherichia coli ECRC100 1.00 OKFHMN_24195 mdtB multidrug efflux RND transporter permease subunit MdtB 0.99 OKFHMN_22605 smrB endonuclease SmrB low > 80
Escherichia coli ECRC101 1.00 MCAODC_20745 mdtB multidrug efflux RND transporter permease subunit MdtB 0.99 MCAODC_13645 smrB endonuclease SmrB low > 87
Escherichia coli ECRC99 1.00 KEDOAH_03955 mdtB multidrug efflux RND transporter permease subunit MdtB 0.99 KEDOAH_05590 smrB endonuclease SmrB — —
Escherichia coli ECRC102 1.00 NIAGMN_22140 mdtB multidrug efflux RND transporter permease subunit MdtB 0.99 NIAGMN_20380 smrB endonuclease SmrB — —
Escherichia coli ECOR27 1.00 NOLOHH_15540 mdtB multidrug efflux RND transporter permease subunit MdtB 0.96 NOLOHH_14240 smrB endonuclease SmrB low > 75
Escherichia coli Nissle 1917 1.00 ECOLIN_RS12200 multidrug efflux RND transporter permease subunit MdtB 0.97 ECOLIN_RS13500 endonuclease SmrB low > 55
Escherichia coli BW25113 1.00 b2075 mdtB multidrug efflux system, subunit B (NCBI) 0.97 b2331 yfcN hypothetical protein (NCBI) low > 76
Escherichia fergusonii Becca 1.00 EFB2_01780 Multidrug resistance protein MdtB 0.97 EFB2_01527 Endonuclease MutS2 low > 86
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_01629 Multidrug resistance protein MdtB 0.97 OHPLBJKB_01374 Endonuclease MutS2 low > 73
Escherichia coli ECRC62 1.00 BNILDI_14455 mdtB multidrug efflux RND transporter permease subunit MdtB 0.97 BNILDI_13160 smrB endonuclease SmrB low > 75
Escherichia coli ECOR38 1.00 HEPCGN_02885 mdtB multidrug efflux RND transporter permease subunit MdtB 0.97 HEPCGN_21810 smrB endonuclease SmrB low > 87
Escherichia coli BL21 1.00 ECD_01980 multidrug efflux system, subunit B 0.97 ECD_02256 putative DNA endonuclease low > 61
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.91 GFF3854 Multidrug transporter MdtB 0.92 GFF1952 FIG001674: hypothetical protein low > 78
Klebsiella michiganensis M5al 0.91 BWI76_RS19255 multidrug transporter subunit MdtB 0.90 BWI76_RS20445 endonuclease SmrB — —
Enterobacter sp. TBS_079 0.90 MPMX20_03061 Multidrug resistance protein MdtB 0.90 MPMX20_03266 Endonuclease MutS2 low > 85
Enterobacter asburiae PDN3 0.90 EX28DRAFT_0483 Cation/multidrug efflux pump 0.91 EX28DRAFT_0273 Uncharacterized protein conserved in bacteria low > 76
Serratia liquefaciens MT49 0.81 IAI46_18975 MdtB/MuxB family multidrug efflux RND transporter permease subunit 0.68 IAI46_18035 endonuclease SmrB low > 86
Pantoea sp. MT58 0.81 IAI47_06870 MdtB/MuxB family multidrug efflux RND transporter permease subunit 0.77 IAI47_06140 endonuclease SmrB low > 76
Erwinia tracheiphila SCR3 0.80 LU632_RS08690 MdtB/MuxB family multidrug efflux RND transporter permease subunit 0.80 LU632_RS07765 smrB endonuclease SmrB low > 74
Pectobacterium carotovorum WPP14 0.79 HER17_RS06320 MdtB/MuxB family multidrug efflux RND transporter permease subunit 0.74 HER17_RS06925 endonuclease SmrB low > 75
Dickeya dadantii 3937 0.77 DDA3937_RS15265 MdtB/MuxB family multidrug efflux RND transporter permease subunit 0.74 DDA3937_RS14590 endonuclease SmrB low > 74
Dickeya dianthicola ME23 0.77 DZA65_RS16165 MdtB/MuxB family multidrug efflux RND transporter permease subunit 0.73 DZA65_RS15475 endonuclease SmrB low > 75
Dickeya dianthicola 67-19 0.76 HGI48_RS15345 MdtB/MuxB family multidrug efflux RND transporter permease subunit 0.74 HGI48_RS14540 endonuclease SmrB low > 71
Rahnella sp. WP5 0.62 EX31_RS13380 MMPL family transporter 0.74 EX31_RS19695 endonuclease SmrB low > 89

Not shown: 41 genomes with orthologs for JDDGAC_28305 only; 7 genomes with orthologs for JDDGAC_26565 only