Conservation of cofitness between JDDGAC_28300 and JDDGAC_22435 in Escherichia coli ECRC98

25 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli ECRC98 1.0 JDDGAC_28300 mdtC multidrug efflux RND transporter permease subunit MdtC 1.0 JDDGAC_22435 ygiB DUF1190 domain-containing protein 0.58 13
Escherichia coli ECRC101 1.00 MCAODC_20750 mdtC multidrug efflux RND transporter permease subunit MdtC 1.00 MCAODC_09315 ygiB DUF1190 domain-containing protein low > 87
Escherichia coli ECRC102 1.00 NIAGMN_22135 mdtC multidrug efflux RND transporter permease subunit MdtC 1.00 NIAGMN_16565 ygiB DUF1190 domain-containing protein — —
Escherichia coli ECRC99 1.00 KEDOAH_03960 mdtC multidrug efflux RND transporter permease subunit MdtC 1.00 KEDOAH_09345 ygiB DUF1190 domain-containing protein — —
Escherichia coli ECRC100 1.00 OKFHMN_24190 mdtC multidrug efflux RND transporter permease subunit MdtC 1.00 OKFHMN_18800 ygiB DUF1190 domain-containing protein low > 80
Escherichia coli ECOR27 1.00 NOLOHH_15535 mdtC multidrug efflux RND transporter permease subunit MdtC 1.00 NOLOHH_10605 ygiB DUF1190 domain-containing protein 0.62 22
Escherichia coli BL21 1.00 ECD_01981 multidrug efflux system, subunit C 1.00 ECD_02909 DUF1190 family protein low > 61
Escherichia coli ECRC62 1.00 BNILDI_14450 mdtC multidrug efflux RND transporter permease subunit MdtC 1.00 BNILDI_00910 ygiB DUF1190 domain-containing protein low > 75
Escherichia coli BW25113 0.99 b2076 mdtC multidrug efflux system, subunit C (NCBI) 1.00 b3037 ygiB conserved outer membrane protein (RefSeq) low > 76
Escherichia coli HS(pFamp)R (ATCC 700891) 0.99 OHPLBJKB_01628 Multidrug resistance protein MdtC 1.00 OHPLBJKB_00667 hypothetical protein low > 73
Escherichia coli ECOR38 0.99 HEPCGN_02880 mdtC multidrug efflux RND transporter permease subunit MdtC 1.00 HEPCGN_17675 ygiB DUF1190 domain-containing protein low > 87
Escherichia coli Nissle 1917 0.99 ECOLIN_RS12205 multidrug efflux RND transporter permease subunit MdtC 1.00 ECOLIN_RS17525 DUF1190 family protein — —
Escherichia fergusonii Becca 0.99 EFB2_01779 Multidrug resistance protein MdtC 1.00 EFB2_00772 hypothetical protein low > 86
Enterobacter asburiae PDN3 0.92 EX28DRAFT_0482 Cation/multidrug efflux pump 0.86 EX28DRAFT_3074 Predicted integral membrane protein low > 76
Enterobacter sp. TBS_079 0.91 MPMX20_03062 Multidrug resistance protein MdtC 0.87 MPMX20_03883 hypothetical protein low > 85
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.90 GFF3853 Multidrug transporter MdtC 0.97 GFF3150 UPF0441 protein ygiB low > 78
Klebsiella michiganensis M5al 0.90 BWI76_RS19260 multidrug transporter subunit MdtC 0.79 BWI76_RS24405 hypothetical protein low > 92
Serratia liquefaciens MT49 0.82 IAI46_18980 multidrug efflux RND transporter permease subunit MdtC 0.63 IAI46_21980 DUF1190 family protein low > 86
Pectobacterium carotovorum WPP14 0.79 HER17_RS06315 multidrug efflux RND transporter permease subunit MdtC 0.63 HER17_RS19830 DUF1190 family protein low > 75
Pantoea sp. MT58 0.79 IAI47_06865 multidrug efflux RND transporter permease subunit MdtC 0.69 IAI47_03130 DUF1190 family protein low > 76
Dickeya dianthicola 67-19 0.78 HGI48_RS15350 multidrug efflux RND transporter permease subunit MdtC 0.57 HGI48_RS01630 DUF1190 family protein low > 71
Dickeya dadantii 3937 0.78 DDA3937_RS15270 multidrug efflux RND transporter permease subunit MdtC 0.56 DDA3937_RS01735 DUF1190 family protein low > 74
Dickeya dianthicola ME23 0.78 DZA65_RS16170 multidrug efflux RND transporter permease subunit MdtC 0.57 DZA65_RS01705 DUF1190 family protein low > 75
Erwinia tracheiphila SCR3 0.73 LU632_RS08685 mdtC multidrug efflux RND transporter permease subunit MdtC 0.77 LU632_RS20640 DUF1190 family protein low > 74
Rahnella sp. WP5 0.53 EX31_RS13375 MMPL family transporter 0.64 EX31_RS08105 DUF1190 family protein low > 89
Bosea sp. OAE506 0.41 ABIE41_RS20140 efflux RND transporter permease subunit 0.11 ABIE41_RS15765 DUF1190 domain-containing protein low > 77

Not shown: 38 genomes with orthologs for JDDGAC_28300 only; 6 genomes with orthologs for JDDGAC_22435 only