Conservation of cofitness between JDDGAC_23235 and JDDGAC_18150 in Escherichia coli ECRC98

20 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli ECRC98 1.0 JDDGAC_23235 idi isopentenyl-diphosphate Delta-isomerase 1.0 JDDGAC_18150 rffM lipopolysaccharide N-acetylmannosaminouronosyltransferase 0.81 20
Escherichia coli ECRC102 1.00 NIAGMN_17360 idi isopentenyl-diphosphate Delta-isomerase 1.00 NIAGMN_12280 rffM lipopolysaccharide N-acetylmannosaminouronosyltransferase — —
Escherichia coli ECRC100 1.00 OKFHMN_19595 idi isopentenyl-diphosphate Delta-isomerase 1.00 OKFHMN_14525 rffM lipopolysaccharide N-acetylmannosaminouronosyltransferase low > 80
Escherichia coli ECRC101 1.00 MCAODC_10115 idi isopentenyl-diphosphate Delta-isomerase 1.00 MCAODC_05030 rffM lipopolysaccharide N-acetylmannosaminouronosyltransferase low > 87
Escherichia coli ECOR27 1.00 NOLOHH_11520 idi isopentenyl-diphosphate Delta-isomerase 0.98 NOLOHH_06660 rffM lipopolysaccharide N-acetylmannosaminouronosyltransferase low > 75
Escherichia coli ECRC99 1.00 KEDOAH_08545 idi isopentenyl-diphosphate Delta-isomerase 1.00 KEDOAH_13625 rffM lipopolysaccharide N-acetylmannosaminouronosyltransferase — —
Escherichia coli BL21 0.99 ECD_02721 isopentenyl diphosphate isomerase 0.99 ECD_03673 UDP-N-acetyl-D-mannosaminuronic acid transferase low > 61
Escherichia coli ECRC62 0.98 BNILDI_10050 idi isopentenyl-diphosphate Delta-isomerase 0.98 BNILDI_04865 rffM lipopolysaccharide N-acetylmannosaminouronosyltransferase low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 0.98 OHPLBJKB_00826 Isopentenyl-diphosphate Delta-isomerase 0.99 OHPLBJKB_04259 UDP-N-acetyl-D-mannosaminuronic acid transferase low > 73
Escherichia coli BW25113 0.96 b2889 idi isopentenyl-diphosphate delta-isomerase (NCBI) 0.99 b3794 rffM putative UDP-N-acetyl-D-mannosaminuronic acid transferase (NCBI) low > 76
Escherichia coli Nissle 1917 0.95 ECOLIN_RS16100 isopentenyl-diphosphate Delta-isomerase 0.99 ECOLIN_RS21780 lipopolysaccharide N-acetylmannosaminouronosyltransferase 0.39 27
Escherichia fergusonii Becca 0.95 EFB2_01012 Isopentenyl-diphosphate Delta-isomerase 0.99 EFB2_04844 UDP-N-acetyl-D-mannosaminuronic acid transferase low > 86
Escherichia coli ECOR38 0.94 HEPCGN_18885 idi isopentenyl-diphosphate Delta-isomerase 0.99 HEPCGN_13235 rffM lipopolysaccharide N-acetylmannosaminouronosyltransferase low > 87
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.72 GFF2986 Isopentenyl-diphosphate delta-isomerase (EC 5.3.3.2) 0.88 GFF2878 Probable UDP-N-acetyl-D-mannosaminuronic acid transferase (EC 2.4.1.-) low > 78
Klebsiella michiganensis M5al 0.71 BWI76_RS23790 isopentenyl-diphosphate Delta-isomerase 0.82 BWI76_RS01135 lipopolysaccharide N-acetylmannosaminouronosyltransferase — —
Enterobacter asburiae PDN3 0.66 EX28DRAFT_2940 isopentenyl-diphosphate delta-isomerase (EC 5.3.3.2) 0.86 EX28DRAFT_4463 Teichoic acid biosynthesis proteins low > 76
Enterobacter sp. TBS_079 0.65 MPMX20_03748 Isopentenyl-diphosphate Delta-isomerase 0.86 MPMX20_04480 UDP-N-acetyl-D-mannosaminuronic acid transferase low > 85
Rahnella sp. WP5 0.51 EX31_RS02215 isopentenyl-diphosphate Delta-isomerase 0.77 EX31_RS15100 lipopolysaccharide N-acetylmannosaminouronosyltransferase low > 89
Pectobacterium carotovorum WPP14 0.25 HER17_RS13245 isopentenyl-diphosphate Delta-isomerase 0.75 HER17_RS01195 lipopolysaccharide N-acetylmannosaminouronosyltransferase low > 75
Serratia liquefaciens MT49 0.23 IAI46_11275 isopentenyl-diphosphate Delta-isomerase 0.74 IAI46_00645 lipopolysaccharide N-acetylmannosaminouronosyltransferase low > 86
Pantoea sp. MT58 0.23 IAI47_13340 isopentenyl-diphosphate Delta-isomerase 0.65 IAI47_18465 lipopolysaccharide N-acetylmannosaminouronosyltransferase low > 76

Not shown: 6 genomes with orthologs for JDDGAC_23235 only; 11 genomes with orthologs for JDDGAC_18150 only