Conservation of cofitness between JDDGAC_25115 and JDDGAC_05930 in Escherichia coli ECRC98

20 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli ECRC98 1.0 JDDGAC_25115 yfhH MurR/RpiR family transcriptional regulator 1.0 JDDGAC_05930 oppD murein tripeptide/oligopeptide ABC transporter ATP-binding protein OppD 0.61 12
Escherichia coli BW25113 1.00 b2561 yfhH orf, hypothetical protein (VIMSS) 0.99 b1246 oppD oligopeptide transporter ATP-binding component (NCBI) low > 76
Escherichia coli ECRC99 1.00 KEDOAH_06770 yfhH MurR/RpiR family transcriptional regulator 1.00 KEDOAH_25640 oppD murein tripeptide/oligopeptide ABC transporter ATP-binding protein OppD — —
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_01146 HTH-type transcriptional regulator MurR 1.00 OHPLBJKB_02437 Oligopeptide transport ATP-binding protein OppD low > 73
Escherichia coli ECRC101 1.00 MCAODC_11980 yfhH MurR/RpiR family transcriptional regulator 1.00 MCAODC_21615 oppD murein tripeptide/oligopeptide ABC transporter ATP-binding protein OppD low > 87
Escherichia coli BL21 1.00 ECD_02455 putative DNA-binding transcriptional regulator 1.00 ECD_01220 oligopeptide ABC transporter ATPase low > 61
Escherichia coli ECRC100 1.00 OKFHMN_21450 yfhH MurR/RpiR family transcriptional regulator 1.00 OKFHMN_28645 oppD murein tripeptide/oligopeptide ABC transporter ATP-binding protein OppD low > 80
Escherichia coli ECOR27 1.00 NOLOHH_13125 yfhH MurR/RpiR family transcriptional regulator 1.00 NOLOHH_20405 oppD murein tripeptide/oligopeptide ABC transporter ATP-binding protein OppD low > 75
Escherichia coli ECRC102 1.00 NIAGMN_19220 yfhH MurR/RpiR family transcriptional regulator 1.00 NIAGMN_27590 oppD murein tripeptide/oligopeptide ABC transporter ATP-binding protein OppD — —
Escherichia coli ECRC62 1.00 BNILDI_11925 yfhH MurR/RpiR family transcriptional regulator 1.00 BNILDI_18550 oppD murein tripeptide/oligopeptide ABC transporter ATP-binding protein OppD low > 75
Escherichia coli Nissle 1917 1.00 ECOLIN_RS14490 MurR/RpiR family transcriptional regulator 1.00 ECOLIN_RS07525 murein tripeptide/oligopeptide ABC transporter ATP-binding protein OppD — —
Escherichia coli ECOR38 1.00 HEPCGN_20595 yfhH MurR/RpiR family transcriptional regulator 1.00 HEPCGN_25110 oppD murein tripeptide/oligopeptide ABC transporter ATP-binding protein OppD low > 87
Escherichia fergusonii Becca 1.00 EFB2_01335 HTH-type transcriptional regulator MurR 1.00 EFB2_02679 Oligopeptide transport ATP-binding protein OppD low > 86
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.83 GFF2466 Sialic acid utilization regulator, RpiR family 0.92 GFF2743 Oligopeptide transport ATP-binding protein OppD (TC 3.A.1.5.1) low > 78
Enterobacter asburiae PDN3 0.81 EX28DRAFT_0085 transcriptional regulator, RpiR family 0.93 EX28DRAFT_0871 oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain low > 76
Enterobacter sp. TBS_079 0.80 MPMX20_03432 HTH-type transcriptional regulator MurR 0.92 MPMX20_02584 Oligopeptide transport ATP-binding protein OppD low > 85
Klebsiella michiganensis M5al 0.78 BWI76_RS21290 DNA-binding transcriptional regulator 0.93 BWI76_RS17225 oligopeptide ABC transporter ATP-binding protein OppD low > 92
Pantoea sp. MT58 0.66 IAI47_04910 MurR/RpiR family transcriptional regulator 0.87 IAI47_09085 ABC transporter ATP-binding protein low > 76
Serratia liquefaciens MT49 0.63 IAI46_19515 MurR/RpiR family transcriptional regulator 0.89 IAI46_14190 ABC transporter ATP-binding protein low > 86
Rahnella sp. WP5 0.61 EX31_RS21865 MurR/RpiR family transcriptional regulator 0.88 EX31_RS10050 ABC transporter ATP-binding protein low > 89
Erwinia tracheiphila SCR3 0.61 LU632_RS18000 MurR/RpiR family transcriptional regulator 0.85 LU632_RS12865 ABC transporter ATP-binding protein low > 74

Not shown: 7 genomes with orthologs for JDDGAC_25115 only; 33 genomes with orthologs for JDDGAC_05930 only