Conservation of cofitness between JDDGAC_09800 and JDDGAC_01860 in Escherichia coli ECRC98

23 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli ECRC98 1.0 JDDGAC_09800 ldtB L,D-transpeptidase 1.0 JDDGAC_01860 lpp murein lipoprotein Lpp 0.94 8
Escherichia coli ECRC100 1.00 OKFHMN_06165 ldtB L,D-transpeptidase 1.00 OKFHMN_27285 lpp murein lipoprotein Lpp 0.62 61
Escherichia coli ECRC101 1.00 MCAODC_25380 ldtB L,D-transpeptidase 1.00 MCAODC_18125 lpp murein lipoprotein Lpp low > 87
Escherichia fergusonii Becca 1.00 EFB2_03286 putative L,D-transpeptidase YbiS 1.00 EFB2_02315 Major outer membrane prolipoprotein Lpp low > 86
Escherichia coli BL21 1.00 ECD_00786 L,D-transpeptidase linking Lpp to murein 1.00 ECD_01646 murein lipoprotein
Escherichia coli ECOR27 1.00 NOLOHH_22515 ldtB L,D-transpeptidase 1.00 NOLOHH_17805 lpp murein lipoprotein Lpp 0.64 31
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_02894 putative L,D-transpeptidase YbiS 1.00 OHPLBJKB_02047 Major outer membrane prolipoprotein Lpp low > 73
Escherichia coli Nissle 1917 1.00 ECOLIN_RS04365 L,D-transpeptidase 1.00 ECOLIN_RS09380 murein lipoprotein Lpp
Escherichia coli ECRC102 1.00 NIAGMN_04210 ldtB L,D-transpeptidase 1.00 NIAGMN_00780 lpp murein lipoprotein Lpp
Escherichia coli ECRC99 1.00 KEDOAH_21745 ldtB L,D-transpeptidase 1.00 KEDOAH_00825 lpp murein lipoprotein Lpp
Escherichia coli ECOR38 1.00 HEPCGN_01875 ldtB L,D-transpeptidase 1.00 HEPCGN_05670 lpp murein lipoprotein Lpp low > 87
Escherichia coli ECRC62 1.00 BNILDI_20795 ldtB L,D-transpeptidase 1.00 BNILDI_16595 lpp murein lipoprotein Lpp 0.72 65
Escherichia coli BW25113 1.00 b0819 ybiS hypothetical protein (NCBI) 1.00 b1677 lpp murein lipoprotein (NCBI) 0.35 6
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.94 GFF716 L,D-transpeptidase YbiS 0.95 GFF3566 major outer membrane lipoprotein 0.67 44
Klebsiella michiganensis M5al 0.93 BWI76_RS09030 transpeptidase 0.95 BWI76_RS16965 murein lipoprotein 0.48 1
Enterobacter sp. TBS_079 0.91 MPMX20_01456 putative L,D-transpeptidase YbiS 0.95 MPMX20_01950 Major outer membrane lipoprotein Lpp 1 low > 85
Enterobacter asburiae PDN3 0.90 EX28DRAFT_2148 Uncharacterized protein conserved in bacteria 0.95 EX28DRAFT_1680 Murein lipoprotein
Serratia liquefaciens MT49 0.73 IAI46_02600 L,D-transpeptidase family protein 0.90 IAI46_11180 major outer membrane lipoprotein
Rahnella sp. WP5 0.73 EX31_RS10780 L,D-transpeptidase family protein 0.86 EX31_RS13875 major outer membrane lipoprotein low > 89
Pantoea sp. MT58 0.72 IAI47_13415 L,D-transpeptidase family protein 0.89 IAI47_10845 major outer membrane lipoprotein 0.83 2
Dickeya dadantii 3937 0.69 DDA3937_RS03570 L,D-transpeptidase family protein 0.74 DDA3937_RS12745 major outer membrane lipoprotein
Dickeya dianthicola ME23 0.69 DZA65_RS03790 L,D-transpeptidase family protein 0.74 DZA65_RS13275 major outer membrane lipoprotein
Dickeya dianthicola 67-19 0.69 HGI48_RS03670 L,D-transpeptidase family protein 0.74 HGI48_RS12810 major outer membrane lipoprotein
Pectobacterium carotovorum WPP14 0.68 HER17_RS17580 L,D-transpeptidase family protein 0.89 HER17_RS08955 major outer membrane lipoprotein

Not shown: 9 genomes with orthologs for JDDGAC_09800 only; 1 genomes with orthologs for JDDGAC_01860 only