Conservation of cofitness between IAI47_08125 and IAI47_10850 in Pantoea sp. MT58
18 genomes with putative orthologs of both genes
Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
Pantoea sp. MT58 | 1.0 | IAI47_08125 | | alpha-amylase | 1.0 | IAI47_10850 | | L,D-transpeptidase family protein | 0.51 | 13 |
Rahnella sp. WP5 | 0.78 | EX31_RS01455 | | alpha-amylase | 0.67 | EX31_RS13880 | | L,D-transpeptidase family protein | low | > 89 |
Escherichia coli ECOR27 | 0.78 | NOLOHH_16375 | amyA | alpha-amylase | 0.50 | NOLOHH_21000 | ldtC | L,D-transpeptidase LdtC | low | > 75 |
Escherichia coli ECRC62 | 0.78 | BNILDI_15165 | amyA | alpha-amylase | 0.50 | BNILDI_19165 | ldtC | L,D-transpeptidase LdtC | low | > 75 |
Escherichia coli HS(pFamp)R (ATCC 700891) | 0.78 | OHPLBJKB_01802 | | Cytoplasmic alpha-amylase | 0.50 | OHPLBJKB_02553 | | putative L,D-transpeptidase YcfS | low | > 73 |
Escherichia coli Nissle 1917 | 0.78 | ECOLIN_RS11000 | | alpha-amylase | 0.50 | ECOLIN_RS06420 | | L,D-transpeptidase LdtC | low | > 55 |
Escherichia coli ECRC102 | 0.78 | NIAGMN_02295 | amyA | alpha-amylase | 0.50 | NIAGMN_24355 | ldtC | L,D-transpeptidase LdtC | — | — |
Escherichia coli BW25113 | 0.78 | b1927 | amyA | cytoplasmic alpha-amylase (NCBI) | 0.50 | b1113 | ycfS | hypothetical protein (NCBI) | low | > 76 |
Escherichia coli ECRC100 | 0.78 | OKFHMN_25755 | amyA | alpha-amylase | 0.50 | OKFHMN_03475 | ldtC | L,D-transpeptidase LdtC | low | > 80 |
Escherichia coli ECRC98 | 0.78 | JDDGAC_00345 | amyA | alpha-amylase | 0.50 | JDDGAC_07135 | ldtC | L,D-transpeptidase LdtC | low | > 86 |
Escherichia coli ECRC101 | 0.78 | MCAODC_19635 | amyA | alpha-amylase | 0.50 | MCAODC_22835 | ldtC | L,D-transpeptidase LdtC | low | > 87 |
Escherichia coli ECRC99 | 0.78 | KEDOAH_02335 | amyA | alpha-amylase | 0.50 | KEDOAH_24280 | ldtC | L,D-transpeptidase LdtC | — | — |
Escherichia fergusonii Becca | 0.77 | EFB2_02018 | | Cytoplasmic alpha-amylase | 0.50 | EFB2_02862 | | putative L,D-transpeptidase YcfS | low | > 86 |
Escherichia coli ECOR38 | 0.77 | HEPCGN_04110 | amyA | alpha-amylase | 0.50 | HEPCGN_24010 | ldtC | L,D-transpeptidase LdtC | low | > 87 |
Klebsiella michiganensis M5al | 0.77 | BWI76_RS18370 | | alpha-amylase | 0.52 | BWI76_RS11200 | | transpeptidase | low | > 92 |
Enterobacter asburiae PDN3 | 0.77 | EX28DRAFT_0619 | | Glycosidases | 0.51 | EX28DRAFT_1817 | | Uncharacterized protein conserved in bacteria | low | > 76 |
Enterobacter sp. TBS_079 | 0.76 | MPMX20_02858 | | Cytoplasmic alpha-amylase | 0.50 | MPMX20_01794 | | putative L,D-transpeptidase YcfS | low | > 85 |
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.75 | GFF4025 | | Cytoplasmic alpha-amylase (EC 3.2.1.1) | 0.52 | GFF3396 | | L,D-transpeptidase YcfS | low | > 78 |
Serratia liquefaciens MT49 | 0.68 | IAI46_07035 | | alpha-amylase | 0.65 | IAI46_11175 | | L,D-transpeptidase family protein | low | > 86 |
Not shown: 5 genomes with orthologs for IAI47_08125 only; 18 genomes with orthologs for IAI47_10850 only