Conservation of cofitness between HSERO_RS20600 and HSERO_RS22040 in Herbaspirillum seropedicae SmR1
7 genomes with putative orthologs of both genes
Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
Herbaspirillum seropedicae SmR1 | 1.0 | HSERO_RS20600 | | transcription regulator protein | 1.0 | HSERO_RS22040 | | CDP-glucose 4,6-dehydratase | 0.28 | 13 |
Variovorax sp. SCN45 | 0.55 | GFF6087 | | Transcriptional regulator, AcrR family | 0.49 | GFF4638 | | CDP-glucose 4,6-dehydratase (EC 4.2.1.45) | low | > 127 |
Rhodopseudomonas palustris CGA009 | 0.33 | TX73_019515 | | TetR/AcrR family transcriptional regulator | 0.48 | TX73_020980 | | CDP-glucose 4,6-dehydratase | low | > 86 |
Ralstonia sp. UNC404CL21Col | 0.31 | ABZR87_RS21235 | | TetR/AcrR family transcriptional regulator | 0.44 | ABZR87_RS22100 | | CDP-glucose 4,6-dehydratase | low | > 80 |
Cupriavidus basilensis FW507-4G11 | 0.30 | RR42_RS19445 | | TetR family transcriptional regulator | 0.40 | RR42_RS23605 | | CDP-glucose 4,6-dehydratase | low | > 128 |
Pseudomonas fluorescens FW300-N2E2 | 0.16 | Pf6N2E2_1890 | | Transcriptional regulator, TetR family | 0.47 | Pf6N2E2_2618 | | Similar to CDP-glucose 4,6-dehydratase (EC 4.2.1.45) | low | > 103 |
Pseudomonas sp. S08-1 | 0.13 | OH686_04065 | | Acyclic terpenes utilization regulator AtuR, TetR family | 0.46 | OH686_02910 | | CDP-glucose 4,6-dehydratase | low | > 80 |
Pseudomonas simiae WCS417 | 0.12 | PS417_19565 | | TetR family transcriptional regulator | 0.49 | PS417_08235 | | CDP-glucose 4,6-dehydratase | — | — |
Not shown: 21 genomes with orthologs for HSERO_RS20600 only; 18 genomes with orthologs for HSERO_RS22040 only