Conservation of cofitness between HSERO_RS13180 and HSERO_RS19930 in Herbaspirillum seropedicae SmR1
7 genomes with putative orthologs of both genes
Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
Herbaspirillum seropedicae SmR1 | 1.0 | HSERO_RS13180 | | urea ABC transporter permease | 1.0 | HSERO_RS19930 | | 3-carboxy-cis,cis-muconate cycloisomerase | 0.32 | 6 |
Pseudomonas fluorescens FW300-N2E2 | 0.72 | Pf6N2E2_185 | | Urea ABC transporter, permease protein UrtC | 0.37 | Pf6N2E2_2831 | | 3-carboxy-cis,cis-muconate cycloisomerase (EC 5.5.1.2) | low | > 103 |
Pseudomonas simiae WCS417 | 0.72 | PS417_11605 | | urea ABC transporter permease | 0.38 | PS417_06730 | | 3-carboxy-cis,cis-muconate cycloisomerase | low | > 88 |
Ralstonia sp. UNC404CL21Col | 0.72 | ABZR87_RS22770 | | urea ABC transporter permease subunit UrtC | 0.35 | ABZR87_RS15785 | | 3-carboxy-cis,cis-muconate cycloisomerase | low | > 80 |
Rhodopseudomonas palustris CGA009 | 0.61 | TX73_006430 | | urea ABC transporter permease subunit UrtC | 0.13 | TX73_019760 | | adenylosuccinate lyase | — | — |
Azospirillum sp. SherDot2 | 0.58 | MPMX19_04585 | | hypothetical protein | 0.31 | MPMX19_05862 | | 3-carboxy-cis,cis-muconate cycloisomerase | low | > 112 |
Pseudomonas syringae pv. syringae B728a | 0.43 | Psyr_2203 | | amino acid/amide ABC transporter membrane protein 2, HAAT family | 0.37 | Psyr_2125 | | 3-carboxy-cis,cis-muconate cycloisomerase | — | — |
Pseudomonas syringae pv. syringae B728a ΔmexB | 0.43 | Psyr_2203 | | amino acid/amide ABC transporter membrane protein 2, HAAT family | 0.37 | Psyr_2125 | | 3-carboxy-cis,cis-muconate cycloisomerase | — | — |
Not shown: 4 genomes with orthologs for HSERO_RS13180 only; 31 genomes with orthologs for HSERO_RS19930 only