Conservation of cofitness between HSERO_RS18595 and HSERO_RS11360 in Herbaspirillum seropedicae SmR1

10 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Herbaspirillum seropedicae SmR1 1.0 HSERO_RS18595 deoxyribodipyrimidine photo-lyase 1.0 HSERO_RS11360 DNA ligase 0.32 13
Ralstonia sp. UNC404CL21Col 0.71 ABZR87_RS21020 cryptochrome/photolyase family protein 0.42 ABZR87_RS08115 DNA ligase D low > 80
Xanthomonas campestris pv. campestris strain 8004 0.63 Xcc-8004.3664.1 photolyase protein family 0.33 Xcc-8004.2247.1 ATP-dependent DNA ligase (EC 6.5.1.1) clustered with Ku protein, LigD low > 74
Bosea sp. OAE506 0.45 ABIE41_RS16750 cryptochrome/photolyase family protein 0.39 ABIE41_RS04575 DNA ligase D low > 77
Pseudomonas sp. S08-1 0.41 OH686_23385 deoxyribodipyrimidine photolyase-related protein 0.41 OH686_01425 DNA ligase D low > 80
Agrobacterium fabrum C58 0.41 Atu4765 hypothetical protein 0.37 Atu4632 ATP-dependent DNA ligase low > 89
Pseudomonas syringae pv. syringae B728a 0.40 Psyr_1785 Deoxyribodipyrimidine photolyase-related protein 0.40 Psyr_3245 ATP-dependent DNA ligase LigD phosphoesterase module / ATP-dependent DNA ligase LigD polymerase module low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.40 Psyr_1785 Deoxyribodipyrimidine photolyase-related protein 0.40 Psyr_3245 ATP-dependent DNA ligase LigD phosphoesterase module / ATP-dependent DNA ligase LigD polymerase module low > 86
Pseudomonas stutzeri RCH2 0.39 Psest_3392 Uncharacterized protein related to deoxyribodipyrimidine photolyase 0.42 Psest_2179 DNA ligase D low > 67
Brevundimonas sp. GW460-12-10-14-LB2 0.39 A4249_RS12810 cryptochrome/photolyase family protein 0.32 A4249_RS10580 DNA ligase D low > 48
Pseudomonas putida KT2440 0.38 PP_2732 conserved protein of unknown function 0.42 PP_3260 DNA ligase D low > 96

Not shown: 15 genomes with orthologs for HSERO_RS18595 only; 22 genomes with orthologs for HSERO_RS11360 only