Conservation of cofitness between HSERO_RS05550 and HSERO_RS06820 in Herbaspirillum seropedicae SmR1
10 genomes with putative orthologs of both genes
Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
Herbaspirillum seropedicae SmR1 | 1.0 | HSERO_RS05550 | | transketolase | 1.0 | HSERO_RS06820 | | multidrug transporter | 0.30 | 19 |
Dickeya dadantii 3937 | 0.74 | DDA3937_RS08175 | | transketolase | 0.38 | DDA3937_RS14115 | | efflux transporter outer membrane subunit | low | > 74 |
Pseudomonas fluorescens FW300-N2E3 | 0.66 | AO353_24510 | | transketolase | 0.50 | AO353_17290 | | multidrug transporter | low | > 101 |
Cupriavidus basilensis FW507-4G11 | 0.64 | RR42_RS33720 | | transketolase | 0.46 | RR42_RS36970 | | RND transporter | low | > 128 |
Pseudomonas fluorescens FW300-N2E2 | 0.31 | Pf6N2E2_1741 | | Transketolase, N-terminal section (EC 2.2.1.1) | 0.52 | Pf6N2E2_2825 | | RND efflux system, outer membrane lipoprotein CmeC | low | > 103 |
Pseudomonas sp. RS175 | 0.31 | PFR28_01927 | | Apulose-4-phosphate transketolase subunit A | 0.52 | PFR28_00630 | | putative efflux pump outer membrane protein TtgC | low | > 88 |
Enterobacter asburiae PDN3 | 0.30 | EX28DRAFT_0310 | | Transketolase, N-terminal subunit | 0.34 | EX28DRAFT_1166 | | efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family | low | > 76 |
Rahnella sp. WP5 | 0.30 | EX31_RS19495 | | transketolase | 0.48 | EX31_RS13330 | | efflux transporter outer membrane subunit | low | > 89 |
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.30 | GFF1904 | | Transketolase, N-terminal section (EC 2.2.1.1) | 0.45 | GFF4245 | | RND efflux system, outer membrane lipoprotein CmeC | low | > 78 |
Pontibacter actiniarum KMM 6156, DSM 19842 | 0.29 | CA264_11950 | | transketolase | 0.17 | CA264_08720 | | RND transporter | — | — |
Echinicola vietnamensis KMM 6221, DSM 17526 | 0.28 | Echvi_2927 | | Transketolase, N-terminal subunit | 0.19 | Echvi_2780 | | efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family | — | — |
Not shown: 25 genomes with orthologs for HSERO_RS05550 only; 24 genomes with orthologs for HSERO_RS06820 only