Conservation of cofitness between HER17_RS04500 and HER17_RS20670 in Pectobacterium carotovorum WPP14

26 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pectobacterium carotovorum WPP14 1.0 HER17_RS04500 glycine betaine/L-proline ABC transporter permease ProW 1.0 HER17_RS20670 dienelactone hydrolase family protein 0.57 8
Dickeya dadantii 3937 0.72 DDA3937_RS16725 glycine betaine/L-proline ABC transporter permease ProW 0.76 DDA3937_RS20375 dienelactone hydrolase family protein low > 74
Serratia liquefaciens MT49 0.71 IAI46_19955 glycine betaine/L-proline ABC transporter permease ProW 0.75 IAI46_01040 dienelactone hydrolase family protein low > 86
Dickeya dianthicola 67-19 0.70 HGI48_RS16805 glycine betaine/L-proline ABC transporter permease ProW 0.76 HGI48_RS00825 dienelactone hydrolase family protein low > 71
Dickeya dianthicola ME23 0.70 DZA65_RS17880 glycine betaine/L-proline ABC transporter permease ProW 0.76 DZA65_RS00880 dienelactone hydrolase family protein low > 75
Pantoea sp. MT58 0.68 IAI47_04520 glycine betaine/L-proline ABC transporter permease ProW 0.71 IAI47_18305 dienelactone hydrolase family protein 0.19 61
Erwinia tracheiphila SCR3 0.67 LU632_RS16825 proW glycine betaine/L-proline ABC transporter permease ProW 0.69 LU632_RS24025 dienelactone hydrolase family protein low > 74
Escherichia coli ECOR27 0.67 NOLOHH_12655 proW glycine betaine/L-proline ABC transporter permease ProW 0.69 NOLOHH_06450 ysgA Putative carboxymethylenebutenolidase low > 75
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.66 GFF1588 L-proline glycine betaine ABC transport system permease protein ProW (TC 3.A.1.12.1) 0.66 GFF257 Putative carboxymethylenebutenolidase (EC 3.1.1.45) low > 78
Enterobacter asburiae PDN3 0.66 EX28DRAFT_2764 ABC-type proline/glycine betaine transport system, permease component 0.71 EX28DRAFT_4495 Dienelactone hydrolase and related enzymes low > 76
Klebsiella michiganensis M5al 0.66 BWI76_RS22070 proline/betaine ABC transporter permease ProW 0.68 BWI76_RS01290 putative dienelactone hydrolase low > 92
Enterobacter sp. TBS_079 0.65 MPMX20_03559 Glycine betaine/proline betaine transport system permease protein ProW 0.72 MPMX20_04450 Carboxymethylenebutenolidase low > 85
Escherichia coli Nissle 1917 0.65 ECOLIN_RS14935 glycine betaine/L-proline ABC transporter permease ProW 0.69 ECOLIN_RS22070 dienelactone hydrolase family protein low > 55
Escherichia coli HS(pFamp)R (ATCC 700891) 0.65 OHPLBJKB_01054 Glycine betaine/proline betaine transport system permease protein ProW 0.69 OHPLBJKB_04221 Carboxymethylenebutenolidase low > 73
Escherichia coli BL21 0.65 ECD_02534 glycine betaine/proline ABC transporter permease 0.69 ECD_03717 putative carboxymethylenebutenolidase low > 61
Escherichia coli BW25113 0.65 b2678 proW glycine betaine transporter subunit (NCBI) 0.69 b3830 ysgA predicted hydrolase (NCBI) low > 76
Escherichia coli ECRC99 0.65 KEDOAH_07320 proW glycine betaine/L-proline ABC transporter permease ProW 0.69 KEDOAH_13830 ysgA Putative carboxymethylenebutenolidase — —
Escherichia coli ECRC102 0.65 NIAGMN_18585 proW glycine betaine/L-proline ABC transporter permease ProW 0.69 NIAGMN_12075 ysgA Putative carboxymethylenebutenolidase — —
Escherichia fergusonii Becca 0.65 EFB2_01249 Glycine betaine/proline betaine transport system permease protein ProW 0.69 EFB2_04791 Carboxymethylenebutenolidase low > 86
Escherichia coli ECOR38 0.65 HEPCGN_20015 proW glycine betaine/L-proline ABC transporter permease ProW 0.69 HEPCGN_12990 ysgA Putative carboxymethylenebutenolidase low > 87
Escherichia coli ECRC62 0.65 BNILDI_11215 proW glycine betaine/L-proline ABC transporter permease ProW 0.69 BNILDI_05080 ysgA Putative carboxymethylenebutenolidase low > 75
Escherichia coli ECRC100 0.65 OKFHMN_20815 proW glycine betaine/L-proline ABC transporter permease ProW 0.69 OKFHMN_14320 ysgA Putative carboxymethylenebutenolidase low > 80
Escherichia coli ECRC98 0.65 JDDGAC_24480 proW glycine betaine/L-proline ABC transporter permease ProW 0.69 JDDGAC_17945 ysgA Putative carboxymethylenebutenolidase low > 86
Escherichia coli ECRC101 0.65 MCAODC_11340 proW glycine betaine/L-proline ABC transporter permease ProW 0.69 MCAODC_04825 ysgA Putative carboxymethylenebutenolidase low > 87
Rahnella sp. WP5 0.65 EX31_RS13615 glycine betaine/L-proline ABC transporter permease ProW 0.70 EX31_RS14650 dienelactone hydrolase family protein low > 89
Variovorax sp. SCN45 0.46 GFF481 Glycine betaine/L-proline transport system permease protein ProW (TC 3.A.1.12.1) 0.53 GFF6106 Dienelactone hydrolase family protein low > 127
Hydrogenophaga sp. GW460-11-11-14-LB1 0.46 GFF4104 L-proline glycine betaine ABC transport system permease protein ProW (TC 3.A.1.12.1) 0.51 GFF5583 Dienelactone hydrolase family low > 90

Not shown: 1 genomes with orthologs for HER17_RS04500 only; 36 genomes with orthologs for HER17_RS20670 only