Conservation of cofitness between HER17_RS02375 and HER17_RS20045 in Pectobacterium carotovorum WPP14

24 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pectobacterium carotovorum WPP14 1.0 HER17_RS02375 fumarate reductase subunit FrdD 1.0 HER17_RS20045 LPS export ABC transporter periplasmic protein LptC 0.76 19
Escherichia coli ECRC99 0.89 KEDOAH_15805 frdD fumarate reductase subunit FrdD 0.62 KEDOAH_10195 lptC LPS export ABC transporter periplasmic protein LptC — —
Escherichia coli ECOR38 0.89 HEPCGN_10585 frdD fumarate reductase subunit FrdD 0.62 HEPCGN_16830 lptC LPS export ABC transporter periplasmic protein LptC low > 87
Escherichia coli BW25113 0.89 b4151 frdD fumarate reductase subunit D (NCBI) 0.62 b3199 yrbK hypothetical protein (NCBI) low > 76
Escherichia fergusonii Becca 0.89 EFB2_04382 Fumarate reductase subunit D 0.62 EFB2_00624 Lipopolysaccharide export system protein LptC low > 86
Escherichia coli ECRC98 0.89 JDDGAC_15995 frdD fumarate reductase subunit FrdD 0.62 JDDGAC_21580 lptC LPS export ABC transporter periplasmic protein LptC low > 86
Escherichia coli BL21 0.89 ECD_04023 fumarate reductase (anaerobic), membrane anchor subunit 0.62 ECD_03064 periplasmic membrane-anchored LPS-binding protein; LPS export protein low > 61
Escherichia coli ECRC102 0.89 NIAGMN_10205 frdD fumarate reductase subunit FrdD 0.62 NIAGMN_15715 lptC LPS export ABC transporter periplasmic protein LptC — —
Escherichia coli ECRC100 0.89 OKFHMN_12360 frdD fumarate reductase subunit FrdD 0.62 OKFHMN_17955 lptC LPS export ABC transporter periplasmic protein LptC low > 80
Escherichia coli ECRC101 0.89 MCAODC_02870 frdD fumarate reductase subunit FrdD 0.62 MCAODC_08475 lptC LPS export ABC transporter periplasmic protein LptC low > 87
Escherichia coli Nissle 1917 0.89 ECOLIN_RS24135 fumarate reductase subunit FrdD 0.62 ECOLIN_RS18410 LPS export ABC transporter periplasmic protein LptC — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.88 OHPLBJKB_03889 Fumarate reductase subunit D 0.62 OHPLBJKB_00501 Lipopolysaccharide export system protein LptC low > 73
Escherichia coli ECOR27 0.88 NOLOHH_04620 frdD fumarate reductase subunit FrdD 0.62 NOLOHH_09755 lptC LPS export ABC transporter periplasmic protein LptC low > 75
Escherichia coli ECRC62 0.88 BNILDI_06870 frdD fumarate reductase subunit FrdD 0.62 BNILDI_01780 lptC LPS export ABC transporter periplasmic protein LptC low > 75
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.88 GFF1999 Fumarate reductase subunit D 0.65 GFF2943 Uncharacterized protein YrbK clustered with lipopolysaccharide transporters low > 78
Enterobacter asburiae PDN3 0.87 EX28DRAFT_3352 succinate dehydrogenase subunit D (EC 1.3.5.1) 0.63 EX28DRAFT_3253 Uncharacterized protein conserved in bacteria low > 76
Enterobacter sp. TBS_079 0.86 MPMX20_00434 Fumarate reductase subunit D 0.63 MPMX20_04105 Lipopolysaccharide export system protein LptC low > 85
Serratia liquefaciens MT49 0.84 IAI46_01535 fumarate reductase subunit FrdD 0.68 IAI46_22455 LPS export ABC transporter periplasmic protein LptC — —
Klebsiella michiganensis M5al 0.82 BWI76_RS02440 fumarate reductase subunit D 0.66 BWI76_RS25250 LPS export ABC transporter periplasmic protein LptC — —
Dickeya dadantii 3937 0.82 DDA3937_RS18980 fumarate reductase subunit FrdD 0.63 DDA3937_RS01545 LPS export ABC transporter periplasmic protein LptC — —
Dickeya dianthicola ME23 0.81 DZA65_RS20195 fumarate reductase subunit FrdD 0.63 DZA65_RS01525 LPS export ABC transporter periplasmic protein LptC low > 75
Dickeya dianthicola 67-19 0.81 HGI48_RS19075 fumarate reductase subunit FrdD 0.63 HGI48_RS01460 LPS export ABC transporter periplasmic protein LptC — —
Rahnella sp. WP5 0.78 EX31_RS08915 fumarate reductase subunit FrdD 0.59 EX31_RS12415 LPS export ABC transporter periplasmic protein LptC low > 89
Erwinia tracheiphila SCR3 0.70 LU632_RS01905 frdD fumarate reductase subunit FrdD 0.63 LU632_RS21265 lptC LPS export ABC transporter periplasmic protein LptC — —
Vibrio cholerae E7946 ATCC 55056 0.51 CSW01_13440 fumarate reductase subunit D 0.20 CSW01_12800 LPS export ABC transporter periplasmic protein LptC — —

Not shown: 0 genomes with orthologs for HER17_RS02375 only; 11 genomes with orthologs for HER17_RS20045 only