Conservation of cofitness between HER17_RS12165 and HER17_RS20040 in Pectobacterium carotovorum WPP14

24 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pectobacterium carotovorum WPP14 1.0 HER17_RS12165 citrate lyase subunit alpha 1.0 HER17_RS20040 3-deoxy-manno-octulosonate-8-phosphatase KdsC 0.75 19
Dickeya dadantii 3937 0.88 DDA3937_RS09790 citrate lyase subunit alpha 0.85 DDA3937_RS01550 3-deoxy-manno-octulosonate-8-phosphatase KdsC — —
Dickeya dianthicola ME23 0.87 DZA65_RS10115 citrate lyase subunit alpha 0.85 DZA65_RS01530 3-deoxy-manno-octulosonate-8-phosphatase KdsC 0.45 7
Dickeya dianthicola 67-19 0.87 HGI48_RS09805 citrate lyase subunit alpha 0.85 HGI48_RS01465 3-deoxy-manno-octulosonate-8-phosphatase KdsC low > 71
Enterobacter asburiae PDN3 0.80 EX28DRAFT_3004 citrate lyase, alpha subunit 0.77 EX28DRAFT_3252 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family low > 76
Enterobacter sp. TBS_079 0.80 MPMX20_03824 Citrate lyase alpha chain 0.77 MPMX20_04104 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase KdsC low > 85
Rahnella sp. WP5 0.78 EX31_RS17800 citrate lyase subunit alpha 0.82 EX31_RS12420 3-deoxy-manno-octulosonate-8-phosphatase KdsC low > 89
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.68 GFF219 Citrate lyase alpha chain (EC 4.1.3.6) 0.77 GFF2942 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (EC 3.1.3.45) low > 78
Klebsiella michiganensis M5al 0.68 BWI76_RS04450 citrate lyase subunit alpha 0.79 BWI76_RS25245 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase low > 92
Escherichia coli ECRC62 0.66 BNILDI_21845 citF citrate lyase subunit alpha 0.78 BNILDI_01775 kdsC 3-deoxy-manno-octulosonate-8-phosphatase KdsC low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 0.66 OHPLBJKB_03090 Citrate lyase alpha chain 0.78 OHPLBJKB_00502 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase KdsC low > 73
Escherichia coli ECOR27 0.66 NOLOHH_23835 citF citrate lyase subunit alpha 0.78 NOLOHH_09760 kdsC 3-deoxy-manno-octulosonate-8-phosphatase KdsC low > 75
Escherichia coli BL21 0.66 ECD_00583 citrate lyase, citrate-ACP transferase (alpha) subunit 0.78 ECD_03063 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase low > 61
Escherichia coli BW25113 0.66 b0615 citF citrate lyase, citrate-ACP transferase (alpha) subunit (NCBI) 0.78 b3198 kdsC 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (NCBI) low > 76
Escherichia coli Nissle 1917 0.66 ECOLIN_RS03360 citrate lyase subunit alpha 0.78 ECOLIN_RS18405 3-deoxy-manno-octulosonate-8-phosphatase KdsC — —
Escherichia coli ECOR38 0.66 HEPCGN_00815 citF citrate lyase subunit alpha 0.78 HEPCGN_16835 kdsC 3-deoxy-manno-octulosonate-8-phosphatase KdsC low > 87
Escherichia fergusonii Becca 0.66 EFB2_03476 Citrate lyase alpha chain 0.78 EFB2_00625 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase KdsC low > 86
Escherichia coli ECRC102 0.66 NIAGMN_05515 citF citrate lyase subunit alpha 0.78 NIAGMN_15720 kdsC 3-deoxy-manno-octulosonate-8-phosphatase KdsC — —
Escherichia coli ECRC101 0.66 MCAODC_26675 citF citrate lyase subunit alpha 0.78 MCAODC_08480 kdsC 3-deoxy-manno-octulosonate-8-phosphatase KdsC low > 87
Escherichia coli ECRC100 0.66 OKFHMN_07460 citF citrate lyase subunit alpha 0.78 OKFHMN_17960 kdsC 3-deoxy-manno-octulosonate-8-phosphatase KdsC low > 80
Escherichia coli ECRC99 0.66 KEDOAH_20510 citF citrate lyase subunit alpha 0.78 KEDOAH_10190 kdsC 3-deoxy-manno-octulosonate-8-phosphatase KdsC — —
Escherichia coli ECRC98 0.66 JDDGAC_11105 citF citrate lyase subunit alpha 0.78 JDDGAC_21585 kdsC 3-deoxy-manno-octulosonate-8-phosphatase KdsC low > 86
Vibrio cholerae E7946 ATCC 55056 0.64 CSW01_04130 citrate lyase subunit alpha 0.60 CSW01_12795 3-deoxy-manno-octulosonate-8-phosphatase KdsC — —
Serratia liquefaciens MT49 0.63 IAI46_16990 citrate lyase subunit alpha 0.81 IAI46_22450 3-deoxy-manno-octulosonate-8-phosphatase KdsC 0.40 55
Fusobacterium nucleatum SB010 0.51 HUW76_08615 citrate lyase subunit alpha 0.30 HUW76_02570 HAD family hydrolase low > 35

Not shown: 2 genomes with orthologs for HER17_RS12165 only; 57 genomes with orthologs for HER17_RS20040 only