Conservation of cofitness between HER17_RS21560 and HER17_RS19515 in Pectobacterium carotovorum WPP14

22 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pectobacterium carotovorum WPP14 1.0 HER17_RS21560 response regulator 1.0 HER17_RS19515 aspartate carbamoyltransferase regulatory subunit 0.57 15
Dickeya dianthicola 67-19 0.82 HGI48_RS21345 response regulator 0.90 HGI48_RS01895 aspartate carbamoyltransferase regulatory subunit low > 71
Dickeya dianthicola ME23 0.81 DZA65_RS22325 response regulator 0.90 DZA65_RS01965 aspartate carbamoyltransferase regulatory subunit low > 75
Pantoea sp. MT58 0.79 IAI47_00340 response regulator 0.81 IAI47_16865 aspartate carbamoyltransferase regulatory subunit low > 76
Rahnella sp. WP5 0.76 EX31_RS03275 response regulator 0.79 EX31_RS12780 aspartate carbamoyltransferase regulatory subunit low > 89
Enterobacter asburiae PDN3 0.74 EX28DRAFT_3057 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 0.78 EX28DRAFT_3445 aspartate carbamoyltransferase, regulatory subunit — —
Serratia liquefaciens MT49 0.74 IAI46_21235 response regulator 0.88 IAI46_02270 aspartate carbamoyltransferase regulatory subunit low > 86
Enterobacter sp. TBS_079 0.72 MPMX20_03863 Transcriptional regulatory protein QseB 0.77 MPMX20_00543 Aspartate carbamoyltransferase regulatory chain low > 85
Klebsiella michiganensis M5al 0.72 BWI76_RS24335 two-component system response regulator QseB 0.78 BWI76_RS02990 aspartate carbamoyltransferase regulatory subunit low > 92
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.72 GFF3138 Two-component system response regulator QseB 0.77 GFF929 Aspartate carbamoyltransferase regulatory chain (PyrI) low > 78
Escherichia coli ECRC62 0.71 BNILDI_00855 Transcriptional regulatory protein QseB 0.76 BNILDI_07380 pyrI aspartate carbamoyltransferase regulatory subunit low > 75
Escherichia coli ECRC102 0.71 NIAGMN_16645 Transcriptional regulatory protein QseB 0.76 NIAGMN_09720 pyrI aspartate carbamoyltransferase regulatory subunit — —
Escherichia coli ECRC99 0.71 KEDOAH_09265 Transcriptional regulatory protein QseB 0.76 KEDOAH_16285 pyrI aspartate carbamoyltransferase regulatory subunit — —
Escherichia coli ECRC100 0.71 OKFHMN_18880 Transcriptional regulatory protein QseB 0.76 OKFHMN_11870 pyrI aspartate carbamoyltransferase regulatory subunit low > 80
Escherichia coli ECRC98 0.71 JDDGAC_22515 Transcriptional regulatory protein QseB 0.76 JDDGAC_15510 pyrI aspartate carbamoyltransferase regulatory subunit low > 86
Escherichia coli ECRC101 0.71 MCAODC_09395 Transcriptional regulatory protein QseB 0.76 MCAODC_02375 pyrI aspartate carbamoyltransferase regulatory subunit low > 87
Escherichia coli ECOR27 0.71 NOLOHH_10660 Transcriptional regulatory protein QseB 0.76 NOLOHH_04130 pyrI aspartate carbamoyltransferase regulatory subunit low > 75
Escherichia coli BW25113 0.71 b3025 qseB DNA-binding response regulator in two-component regulatory system with QseC (NCBI) 0.76 b4244 pyrI aspartate carbamoyltransferase regulatory subunit (NCBI) low > 76
Escherichia fergusonii Becca 0.70 EFB2_00788 Transcriptional regulatory protein QseB 0.76 EFB2_04289 Aspartate carbamoyltransferase regulatory chain low > 86
Escherichia coli BL21 0.70 ECD_02897 quorum sensing DNA-binding response regulator in two-component regulatory system with QseC 0.76 ECD_04112 aspartate carbamoyltransferase, regulatory subunit low > 61
Escherichia coli ECOR38 0.70 HEPCGN_17740 Quorum sensing DNA-binding response regulator in two-component regulatory system with QseC 0.76 HEPCGN_10065 pyrI aspartate carbamoyltransferase regulatory subunit low > 87
Escherichia coli Nissle 1917 0.70 ECOLIN_RS17425 quorum sensing response regulator transcription factor QseB 0.76 ECOLIN_RS24620 aspartate carbamoyltransferase regulatory subunit low > 55
Escherichia coli HS(pFamp)R (ATCC 700891) 0.70 OHPLBJKB_00677 Transcriptional regulatory protein QseB 0.76 OHPLBJKB_03790 Aspartate carbamoyltransferase regulatory chain low > 73

Not shown: 41 genomes with orthologs for HER17_RS21560 only; 12 genomes with orthologs for HER17_RS19515 only