Conservation of cofitness between HER17_RS12180 and HER17_RS18165 in Pectobacterium carotovorum WPP14

24 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pectobacterium carotovorum WPP14 1.0 HER17_RS12180 [citrate (pro-3S)-lyase] ligase 1.0 HER17_RS18165 U32 family peptidase 0.70 13
Dickeya dadantii 3937 0.74 DDA3937_RS07825 [citrate (pro-3S)-lyase] ligase 0.87 DDA3937_RS03110 U32 family peptidase low > 74
Dickeya dianthicola 67-19 0.71 HGI48_RS09790 [citrate (pro-3S)-lyase] ligase 0.86 HGI48_RS03285 U32 family peptidase low > 71
Dickeya dianthicola ME23 0.70 DZA65_RS10100 [citrate (pro-3S)-lyase] ligase 0.84 DZA65_RS03280 U32 family peptidase low > 75
Rahnella sp. WP5 0.57 EX31_RS17785 [citrate (pro-3S)-lyase] ligase 0.82 EX31_RS08485 U32 family peptidase low > 89
Enterobacter sp. TBS_079 0.49 MPMX20_03827 [Citrate [pro-3S]-lyase] ligase 0.78 MPMX20_04063 hypothetical protein low > 85
Enterobacter asburiae PDN3 0.48 EX28DRAFT_3007 [citrate (pro-3S)-lyase] ligase 0.80 EX28DRAFT_3208 Collagenase and related proteases low > 76
Azospirillum sp. SherDot2 0.47 MPMX19_03122 [Citrate [pro-3S]-lyase] ligase 0.20 MPMX19_03050 hypothetical protein low > 112
Escherichia coli ECOR38 0.43 HEPCGN_00830 citC [citrate (pro-3S)-lyase] ligase 0.79 HEPCGN_17045 rlhA U32 family peptidase low > 87
Escherichia coli ECRC62 0.43 BNILDI_21830 citC [citrate (pro-3S)-lyase] ligase 0.79 BNILDI_01560 rlhA U32 family peptidase low > 75
Escherichia coli Nissle 1917 0.43 ECOLIN_RS03375 [citrate (pro-3S)-lyase] ligase 0.79 ECOLIN_RS18145 U32 family peptidase low > 55
Escherichia coli HS(pFamp)R (ATCC 700891) 0.43 OHPLBJKB_03087 [Citrate [pro-3S]-lyase] ligase 0.79 OHPLBJKB_00541 hypothetical protein low > 73
Escherichia coli BW25113 0.43 b0618 citC citrate lyase synthetase (citrate (pro-3S)-lyase ligase (VIMSS) 0.79 b3159 yhbV orf, hypothetical protein (VIMSS) low > 76
Escherichia coli ECOR27 0.43 NOLOHH_23820 citC [citrate (pro-3S)-lyase] ligase 0.79 NOLOHH_09970 rlhA U32 family peptidase low > 75
Escherichia fergusonii Becca 0.43 EFB2_03473 [Citrate [pro-3S]-lyase] ligase 0.79 EFB2_00664 hypothetical protein low > 86
Escherichia coli BL21 0.42 ECD_00586 citrate lyase ligase; [citrate [pro-3S]-lyase] ligase 0.79 ECD_03026 U32 peptidase family protein low > 61
Escherichia coli ECRC101 0.42 MCAODC_26660 citC [citrate (pro-3S)-lyase] ligase 0.79 MCAODC_08690 rlhA U32 family peptidase 0.43 48
Escherichia coli ECRC99 0.42 KEDOAH_20525 citC [citrate (pro-3S)-lyase] ligase 0.79 KEDOAH_09980 rlhA U32 family peptidase — —
Escherichia coli ECRC98 0.42 JDDGAC_11090 citC [citrate (pro-3S)-lyase] ligase 0.79 JDDGAC_21795 rlhA U32 family peptidase low > 86
Vibrio cholerae E7946 ATCC 55056 0.42 CSW01_04115 [citrate (pro-3S)-lyase] ligase 0.65 CSW01_03430 U32 family peptidase low > 62
Klebsiella michiganensis M5al 0.42 BWI76_RS04435 [citrate (pro-3S)-lyase] ligase 0.78 BWI76_RS24975 U32 family peptidase low > 92
Escherichia coli ECRC102 0.42 NIAGMN_05500 citC [citrate (pro-3S)-lyase] ligase 0.79 NIAGMN_15930 rlhA U32 family peptidase — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.42 GFF222 [Citrate [pro-3S]-lyase] ligase (EC 6.2.1.22) 0.79 GFF1509 FIG139928: Putative protease low > 78
Escherichia coli ECRC100 0.42 OKFHMN_07445 citC [citrate (pro-3S)-lyase] ligase 0.79 OKFHMN_18170 rlhA U32 family peptidase low > 80
Serratia liquefaciens MT49 0.40 IAI46_17005 [citrate (pro-3S)-lyase] ligase 0.84 IAI46_02010 U32 family peptidase low > 86

Not shown: 1 genomes with orthologs for HER17_RS12180 only; 26 genomes with orthologs for HER17_RS18165 only