Conservation of cofitness between HER17_RS02785 and HER17_RS16045 in Pectobacterium carotovorum WPP14

23 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pectobacterium carotovorum WPP14 1.0 HER17_RS02785 tRNA/rRNA methyltransferase 1.0 HER17_RS16045 exonuclease subunit SbcD 0.60 19
Dickeya dadantii 3937 0.76 DDA3937_RS18420 tRNA/rRNA methyltransferase 0.71 DDA3937_RS05420 exonuclease subunit SbcD low > 74
Dickeya dianthicola 67-19 0.76 HGI48_RS18350 tRNA/rRNA methyltransferase 0.71 HGI48_RS05480 exonuclease subunit SbcD low > 71
Serratia liquefaciens MT49 0.75 IAI46_03020 tRNA/rRNA methyltransferase 0.71 IAI46_04770 exonuclease subunit SbcD low > 86
Dickeya dianthicola ME23 0.75 DZA65_RS19490 tRNA/rRNA methyltransferase 0.71 DZA65_RS05805 exonuclease subunit SbcD low > 75
Enterobacter asburiae PDN3 0.74 EX28DRAFT_3612 RNA methyltransferase, TrmH family, group 1 0.58 EX28DRAFT_2576 Exodeoxyribonuclease I subunit D (EC 3.1.11.1) low > 76
Rahnella sp. WP5 0.74 EX31_RS03950 tRNA/rRNA methyltransferase 0.71 EX31_RS22035 exonuclease subunit SbcD low > 89
Enterobacter sp. TBS_079 0.74 MPMX20_00709 putative tRNA/rRNA methyltransferase 0.57 MPMX20_00985 Nuclease SbcCD subunit D low > 85
Escherichia coli BL21 0.73 ECD_04279 putative methyltransferase 0.58 ECD_00346 exonuclease, dsDNA, ATP-dependent low > 61
Escherichia fergusonii Becca 0.73 EFB2_04042 tRNA (guanosine(18)-2'-O)-methyltransferase 0.58 EFB2_03659 Nuclease SbcCD subunit D low > 86
Escherichia coli BW25113 0.73 b4403 yjtD predicted rRNA methyltransferase (NCBI) 0.58 b0398 sbcD exonuclease, dsDNA, ATP-dependent (NCBI) low > 76
Escherichia coli ECRC62 0.73 BNILDI_08150 lasT tRNA/rRNA methyltransferase 0.58 BNILDI_22895 sbcD exonuclease subunit SbcD low > 75
Escherichia coli ECOR38 0.73 HEPCGN_09125 lasT tRNA/rRNA methyltransferase 0.58 HEPCGN_07190 sbcD exonuclease subunit SbcD low > 87
Escherichia coli ECOR27 0.73 NOLOHH_03450 lasT tRNA/rRNA methyltransferase 0.58 NOLOHH_01480 sbcD exonuclease subunit SbcD low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 0.73 OHPLBJKB_03659 hypothetical protein 0.58 OHPLBJKB_03278 Nuclease SbcCD subunit D low > 73
Escherichia coli ECRC102 0.72 NIAGMN_08970 lasT tRNA/rRNA methyltransferase 0.58 NIAGMN_06605 sbcD exonuclease subunit SbcD — —
Escherichia coli ECRC101 0.72 MCAODC_01635 lasT tRNA/rRNA methyltransferase 0.58 MCAODC_27775 sbcD exonuclease subunit SbcD low > 87
Escherichia coli ECRC98 0.72 JDDGAC_14715 lasT tRNA/rRNA methyltransferase 0.58 JDDGAC_12205 sbcD exonuclease subunit SbcD 0.59 46
Escherichia coli ECRC100 0.72 OKFHMN_11120 lasT tRNA/rRNA methyltransferase 0.58 OKFHMN_08550 sbcD exonuclease subunit SbcD low > 80
Escherichia coli ECRC99 0.72 KEDOAH_17035 lasT tRNA/rRNA methyltransferase 0.58 KEDOAH_19415 sbcD exonuclease subunit SbcD — —
Klebsiella michiganensis M5al 0.69 BWI76_RS04235 tRNA/rRNA methyltransferase 0.54 BWI76_RS06225 exonuclease sbcCD subunit D low > 92
Pantoea sp. MT58 0.68 IAI47_16225 tRNA/rRNA methyltransferase 0.60 IAI47_14860 exonuclease subunit SbcD low > 76
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.66 GFF1077 tRNA:Cm32/Um32 methyltransferase 0.56 GFF4294 Exonuclease SbcD low > 78
Shewanella amazonensis SB2B 0.37 Sama_1753 putative RNA methyltransferase (RefSeq) 0.17 Sama_1267 exonuclease SbcD, putative (RefSeq) low > 62

Not shown: 2 genomes with orthologs for HER17_RS02785 only; 24 genomes with orthologs for HER17_RS16045 only