Conservation of cofitness between HER17_RS01965 and HER17_RS12170 in Pectobacterium carotovorum WPP14

26 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pectobacterium carotovorum WPP14 1.0 HER17_RS01965 peptidylprolyl isomerase 1.0 HER17_RS12170 citrate (pro-3S)-lyase subunit beta 0.84 2
Dickeya dianthicola ME23 0.72 DZA65_RS20605 peptidylprolyl isomerase 0.94 DZA65_RS10110 citrate (pro-3S)-lyase subunit beta low > 75
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.71 GFF3723 FKBP-type peptidyl-prolyl cis-trans isomerase SlyD (EC 5.2.1.8) 0.72 GFF220 Citrate lyase beta chain (EC 4.1.3.6) low > 78
Dickeya dadantii 3937 0.71 DDA3937_RS19395 peptidylprolyl isomerase 0.94 DDA3937_RS07835 citrate (pro-3S)-lyase subunit beta — —
Dickeya dianthicola 67-19 0.71 HGI48_RS19515 peptidylprolyl isomerase 0.94 HGI48_RS09800 citrate (pro-3S)-lyase subunit beta 0.45 70
Escherichia coli ECRC99 0.71 KEDOAH_10855 slyD peptidylprolyl isomerase 0.66 KEDOAH_20515 citE citrate (pro-3S)-lyase subunit beta — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.71 OHPLBJKB_00354 FKBP-type peptidyl-prolyl cis-trans isomerase SlyD 0.66 OHPLBJKB_03089 Citrate lyase subunit beta low > 73
Escherichia coli Nissle 1917 0.71 ECOLIN_RS19180 peptidylprolyl isomerase 0.66 ECOLIN_RS03365 citrate (pro-3S)-lyase subunit beta — —
Escherichia fergusonii Becca 0.71 EFB2_00474 FKBP-type peptidyl-prolyl cis-trans isomerase SlyD 0.66 EFB2_03475 Citrate lyase subunit beta low > 86
Escherichia coli BL21 0.71 ECD_03200 FKBP-type peptidyl prolyl cis-trans isomerase (rotamase) 0.66 ECD_00584 citrate lyase, citryl-ACP lyase (beta) subunit low > 61
Escherichia coli ECRC102 0.71 NIAGMN_15055 slyD peptidylprolyl isomerase 0.65 NIAGMN_05510 citE citrate lyase subunit beta — —
Escherichia coli ECOR38 0.71 HEPCGN_16115 slyD peptidylprolyl isomerase 0.66 HEPCGN_00820 citE citrate (pro-3S)-lyase subunit beta low > 87
Escherichia coli ECRC98 0.71 JDDGAC_20915 slyD peptidylprolyl isomerase 0.66 JDDGAC_11100 citE citrate (pro-3S)-lyase subunit beta low > 86
Escherichia coli BW25113 0.71 b3349 slyD FKBP-type peptidyl prolyl cis-trans isomerase (rotamase) (NCBI) 0.66 b0616 citE citrate lyase beta chain (acyl lyase subunit) (VIMSS) low > 76
Escherichia coli ECRC62 0.71 BNILDI_02435 slyD peptidylprolyl isomerase 0.66 BNILDI_21840 citE citrate (pro-3S)-lyase subunit beta low > 75
Escherichia coli ECRC101 0.71 MCAODC_07815 slyD peptidylprolyl isomerase 0.66 MCAODC_26670 citE citrate (pro-3S)-lyase subunit beta low > 87
Escherichia coli ECRC100 0.71 OKFHMN_17285 slyD peptidylprolyl isomerase 0.66 OKFHMN_07455 citE citrate (pro-3S)-lyase subunit beta low > 80
Escherichia coli ECOR27 0.71 NOLOHH_09085 slyD peptidylprolyl isomerase 0.65 NOLOHH_23830 citE citrate lyase subunit beta low > 75
Enterobacter asburiae PDN3 0.70 EX28DRAFT_4181 FKBP-type peptidyl-prolyl cis-trans isomerases 2 0.87 EX28DRAFT_3005 citrate lyase, beta subunit low > 76
Enterobacter sp. TBS_079 0.70 MPMX20_04242 hypothetical protein 0.87 MPMX20_03825 Citrate lyase subunit beta low > 85
Klebsiella michiganensis M5al 0.68 BWI76_RS25920 peptidylprolyl isomerase 0.71 BWI76_RS04445 citrate (pro-3S)-lyase subunit beta low > 92
Kangiella aquimarina DSM 16071 0.36 B158DRAFT_0074 FKBP-type peptidyl-prolyl cis-trans isomerases 2 0.17 B158DRAFT_1401 Citrate lyase beta subunit low > 40
Dyella japonica UNC79MFTsu3.2 0.34 ABZR86_RS00495 peptidylprolyl isomerase 0.24 ABZR86_RS14500 CoA ester lyase low > 74
Pseudomonas fluorescens FW300-N2E2 0.33 Pf6N2E2_5262 FKBP-type peptidyl-prolyl cis-trans isomerase SlyD (EC 5.2.1.8) 0.21 Pf6N2E2_1831 Citrate lyase beta chain (EC 4.1.3.6) low > 103
Magnetospirillum magneticum AMB-1 0.27 AMB_RS19590 peptidylprolyl isomerase 0.27 AMB_RS19980 CoA ester lyase low > 64
Hydrogenophaga sp. GW460-11-11-14-LB1 0.24 GFF3652 FKBP-type peptidyl-prolyl cis-trans isomerase SlyD (EC 5.2.1.8) 0.20 GFF5660 Citrate lyase beta chain (EC 4.1.3.6) — —
Variovorax sp. SCN45 0.22 GFF7163 FKBP-type peptidyl-prolyl cis-trans isomerase SlyD (EC 5.2.1.8) 0.21 GFF2372 Similar to citrate lyase beta chain, 3 low > 127

Not shown: 36 genomes with orthologs for HER17_RS01965 only; 22 genomes with orthologs for HER17_RS12170 only