Conservation of cofitness between HER17_RS00495 and HER17_RS12025 in Pectobacterium carotovorum WPP14

24 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pectobacterium carotovorum WPP14 1.0 HER17_RS00495 branched-chain amino acid ABC transporter substrate-binding protein 1.0 HER17_RS12025 porin 0.95 15
Dickeya dadantii 3937 0.91 DDA3937_RS00660 branched-chain amino acid ABC transporter substrate-binding protein 0.50 DDA3937_RS12900 porin low > 74
Rahnella sp. WP5 0.88 EX31_RS14805 branched-chain amino acid ABC transporter substrate-binding protein 0.45 EX31_RS18140 porin OmpC low > 89
Dickeya dianthicola 67-19 0.88 HGI48_RS20730 high-affinity branched-chain amino acid ABC transporter substrate-binding protein 0.51 HGI48_RS12975 porin low > 71
Dickeya dianthicola ME23 0.88 DZA65_RS21740 branched-chain amino acid ABC transporter substrate-binding protein 0.50 DZA65_RS13435 porin low > 75
Serratia liquefaciens MT49 0.87 IAI46_00960 branched-chain amino acid ABC transporter substrate-binding protein 0.44 IAI46_08755 porin OmpC low > 86
Erwinia tracheiphila SCR3 0.82 LU632_RS19255 branched-chain amino acid ABC transporter substrate-binding protein 0.48 LU632_RS09915 ompC porin OmpC low > 74
Escherichia coli ECRC102 0.79 NIAGMN_14510 livK high-affinity branched-chain amino acid ABC transporter substrate-binding protein LivK 0.46 NIAGMN_03100 ompF porin OmpF — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.79 OHPLBJKB_00245 Leucine-specific-binding protein 0.46 OHPLBJKB_02737 Outer membrane protein F low > 73
Escherichia coli ECRC101 0.79 MCAODC_07270 livK high-affinity branched-chain amino acid ABC transporter substrate-binding protein LivK 0.46 MCAODC_24770 ompF porin OmpF low > 87
Escherichia coli ECRC62 0.79 BNILDI_02970 livK high-affinity branched-chain amino acid ABC transporter substrate-binding protein LivK 0.46 BNILDI_20190 ompF_G141E outer membrane protein F OmpF low > 75
Escherichia coli ECRC98 0.79 JDDGAC_20370 livK high-affinity branched-chain amino acid ABC transporter substrate-binding protein LivK 0.46 JDDGAC_08990 ompF porin OmpF 0.69 5
Escherichia coli ECRC100 0.79 OKFHMN_16740 livK high-affinity branched-chain amino acid ABC transporter substrate-binding protein LivK 0.46 OKFHMN_05380 ompF porin OmpF low > 80
Escherichia coli ECOR27 0.79 NOLOHH_08535 livK high-affinity branched-chain amino acid ABC transporter substrate-binding protein LivK 0.46 NOLOHH_21935 ompF_G141E outer membrane protein F OmpF low > 75
Escherichia coli ECRC99 0.79 KEDOAH_11400 livK high-affinity branched-chain amino acid ABC transporter substrate-binding protein LivK 0.46 KEDOAH_22355 ompF porin OmpF — —
Escherichia coli BW25113 0.79 b3458 livK leucine transporter subunit (NCBI) 0.46 b0929 ompF outer membrane porin 1a (Ia;b;F) (NCBI) low > 76
Escherichia fergusonii Becca 0.79 EFB2_00364 Leucine-specific-binding protein 0.46 EFB2_03135 Outer membrane porin F low > 86
Escherichia coli ECOR38 0.79 HEPCGN_15560 livK high-affinity branched-chain amino acid ABC transporter substrate-binding protein LivK 0.47 HEPCGN_23145 ompF porin OmpF low > 87
Enterobacter asburiae PDN3 0.79 EX28DRAFT_4290 ABC-type branched-chain amino acid transport systems, periplasmic component 0.44 EX28DRAFT_1081 Outer membrane protein (porin) low > 76
Escherichia coli Nissle 1917 0.79 ECOLIN_RS19775 high-affinity branched-chain amino acid ABC transporter substrate-binding protein LivK 0.46 ECOLIN_RS04920 porin OmpF low > 55
Enterobacter sp. TBS_079 0.78 MPMX20_04334 Leucine-specific-binding protein 0.44 MPMX20_02381 Outer membrane porin protein OmpD low > 85
Escherichia coli BL21 0.78 ECD_03307 leucine transporter subunit 0.46 ECD_00933 outer membrane porin 1a (Ia low > 61
Pantoea sp. MT58 0.78 IAI47_01565 branched-chain amino acid ABC transporter substrate-binding protein 0.43 IAI47_12760 porin OmpF low > 76
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.77 GFF545 High-affinity leucine-specific transport system, periplasmic binding protein LivK (TC 3.A.1.4.1) 0.43 GFF2563 Outer membrane porin protein NmpC precursor 0.33 49
Klebsiella michiganensis M5al 0.77 BWI76_RS26350 branched chain amino acid ABC transporter substrate-binding protein 0.45 BWI76_RS12725 outer membrane pore protein N, non-specific low > 92

Not shown: 45 genomes with orthologs for HER17_RS00495 only; 4 genomes with orthologs for HER17_RS12025 only