Conservation of cofitness between HER17_RS05755 and HER17_RS11020 in Pectobacterium carotovorum WPP14

24 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pectobacterium carotovorum WPP14 1.0 HER17_RS05755 uracil-DNA glycosylase 1.0 HER17_RS11020 oligopeptide ABC transporter substrate-binding protein OppA 0.51 15
Dickeya dianthicola ME23 0.87 DZA65_RS16955 uracil-DNA glycosylase 0.81 DZA65_RS10860 oligopeptide ABC transporter substrate-binding protein OppA low > 75
Dickeya dianthicola 67-19 0.87 HGI48_RS15875 uracil-DNA glycosylase 0.81 HGI48_RS10380 oligopeptide ABC transporter substrate-binding protein OppA low > 71
Dickeya dadantii 3937 0.87 DDA3937_RS15790 uracil-DNA glycosylase 0.79 DDA3937_RS10375 oligopeptide ABC transporter substrate-binding protein OppA low > 74
Rahnella sp. WP5 0.87 EX31_RS21775 uracil-DNA glycosylase 0.77 EX31_RS10065 oligopeptide ABC transporter substrate-binding protein OppA low > 89
Serratia liquefaciens MT49 0.86 IAI46_19620 uracil-DNA glycosylase 0.78 IAI46_14205 oligopeptide ABC transporter substrate-binding protein OppA low > 86
Escherichia coli BW25113 0.79 b2580 ung uracil-DNA glycosylase (NCBI) 0.76 b1243 oppA oligopeptide transporter subunit (NCBI) low > 76
Escherichia coli ECRC62 0.79 BNILDI_11815 ung uracil-DNA glycosylase 0.77 BNILDI_18565 oppA oligopeptide ABC transporter substrate-binding protein OppA low > 75
Escherichia coli Nissle 1917 0.79 ECOLIN_RS14600 uracil-DNA glycosylase 0.77 ECOLIN_RS07510 oligopeptide ABC transporter substrate-binding protein OppA low > 55
Escherichia coli ECRC98 0.79 JDDGAC_25005 ung uracil-DNA glycosylase 0.77 JDDGAC_05945 oppA oligopeptide ABC transporter substrate-binding protein OppA low > 86
Escherichia coli ECRC99 0.79 KEDOAH_06880 ung uracil-DNA glycosylase 0.77 KEDOAH_25625 oppA oligopeptide ABC transporter substrate-binding protein OppA — —
Escherichia coli ECRC101 0.79 MCAODC_11870 ung uracil-DNA glycosylase 0.77 MCAODC_21630 oppA oligopeptide ABC transporter substrate-binding protein OppA low > 87
Escherichia coli ECRC100 0.79 OKFHMN_21340 ung uracil-DNA glycosylase 0.77 OKFHMN_28630 oppA oligopeptide ABC transporter substrate-binding protein OppA — —
Escherichia coli ECRC102 0.79 NIAGMN_19110 ung uracil-DNA glycosylase 0.77 NIAGMN_27605 oppA oligopeptide ABC transporter substrate-binding protein OppA — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.79 OHPLBJKB_01126 Uracil-DNA glycosylase 0.77 OHPLBJKB_02440 Periplasmic oligopeptide-binding protein low > 73
Escherichia fergusonii Becca 0.79 EFB2_01316 Uracil-DNA glycosylase 0.77 EFB2_02682 Periplasmic oligopeptide-binding protein low > 86
Escherichia coli BL21 0.79 ECD_02474 uracil-DNA-glycosylase 0.77 ECD_01217 oligopeptide ABC transporter periplasmic binding protein low > 61
Escherichia coli ECOR27 0.79 NOLOHH_13010 ung uracil-DNA glycosylase 0.77 NOLOHH_20420 oppA oligopeptide ABC transporter substrate-binding protein OppA low > 75
Escherichia coli ECOR38 0.78 HEPCGN_20465 ung uracil-DNA glycosylase 0.77 HEPCGN_25095 oppA oligopeptide ABC transporter substrate-binding protein OppA low > 87
Vibrio cholerae E7946 ATCC 55056 0.78 CSW01_11950 uracil-DNA glycosylase 0.55 CSW01_05545 peptide ABC transporter substrate-binding protein low > 62
Enterobacter asburiae PDN3 0.77 EX28DRAFT_0067 Uracil-DNA glycosylase (EC 3.2.2.-) 0.77 EX28DRAFT_0868 ABC-type oligopeptide transport system, periplasmic component low > 76
Pantoea sp. MT58 0.76 IAI47_04825 uracil-DNA glycosylase 0.70 IAI47_09070 oligopeptide ABC transporter substrate-binding protein OppA low > 76
Erwinia tracheiphila SCR3 0.75 LU632_RS16970 ung uracil-DNA glycosylase 0.72 LU632_RS12880 oppA oligopeptide ABC transporter substrate-binding protein OppA low > 74
Bosea sp. OAE506 0.40 ABIE41_RS05980 uracil-DNA glycosylase 0.27 ABIE41_RS21730 peptide ABC transporter substrate-binding protein low > 77
Bifidobacterium breve UCC2003 0.35 BBR_RS17485 uracil-DNA glycosylase 0.11 BBR_RS16650 ABC transporter substrate-binding protein low > 34

Not shown: 56 genomes with orthologs for HER17_RS05755 only; 0 genomes with orthologs for HER17_RS11020 only