Conservation of cofitness between HER17_RS12180 and HER17_RS10525 in Pectobacterium carotovorum WPP14

23 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pectobacterium carotovorum WPP14 1.0 HER17_RS12180 [citrate (pro-3S)-lyase] ligase 1.0 HER17_RS10525 fumarate/nitrate reduction transcriptional regulator Fnr 0.76 5
Dickeya dadantii 3937 0.74 DDA3937_RS07825 [citrate (pro-3S)-lyase] ligase 0.97 DDA3937_RS10950 fumarate/nitrate reduction transcriptional regulator Fnr low > 74
Dickeya dianthicola 67-19 0.71 HGI48_RS09790 [citrate (pro-3S)-lyase] ligase 0.97 HGI48_RS10900 fumarate/nitrate reduction transcriptional regulator Fnr low > 71
Dickeya dianthicola ME23 0.70 DZA65_RS10100 [citrate (pro-3S)-lyase] ligase 0.97 DZA65_RS11360 fumarate/nitrate reduction transcriptional regulator Fnr low > 75
Rahnella sp. WP5 0.57 EX31_RS17785 [citrate (pro-3S)-lyase] ligase 0.94 EX31_RS07200 FNR family transcription factor low > 89
Enterobacter sp. TBS_079 0.49 MPMX20_03827 [Citrate [pro-3S]-lyase] ligase 0.95 MPMX20_02035 Fumarate and nitrate reduction regulatory protein low > 85
Enterobacter asburiae PDN3 0.48 EX28DRAFT_3007 [citrate (pro-3S)-lyase] ligase 0.95 EX28DRAFT_1540 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases low > 76
Azospirillum sp. SherDot2 0.47 MPMX19_03122 [Citrate [pro-3S]-lyase] ligase 0.27 MPMX19_00212 Nitrogen fixation regulation protein FixK low > 112
Escherichia coli ECOR38 0.43 HEPCGN_00830 citC [citrate (pro-3S)-lyase] ligase 0.96 HEPCGN_25925 fnr fumarate/nitrate reduction transcriptional regulator Fnr low > 87
Escherichia coli Nissle 1917 0.43 ECOLIN_RS03375 [citrate (pro-3S)-lyase] ligase 0.96 ECOLIN_RS08005 fumarate/nitrate reduction transcriptional regulator Fnr low > 55
Escherichia coli ECOR27 0.43 NOLOHH_23820 citC [citrate (pro-3S)-lyase] ligase 0.96 NOLOHH_19940 fnr fumarate/nitrate reduction transcriptional regulator Fnr low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 0.43 OHPLBJKB_03087 [Citrate [pro-3S]-lyase] ligase 0.96 OHPLBJKB_02348 Fumarate and nitrate reduction regulatory protein low > 73
Escherichia coli BW25113 0.43 b0618 citC citrate lyase synthetase (citrate (pro-3S)-lyase ligase (VIMSS) 0.96 b1334 fnr DNA-binding transcriptional dual regulator, global regulator of anaerobic growth (NCBI) low > 76
Escherichia coli ECRC62 0.43 BNILDI_21830 citC [citrate (pro-3S)-lyase] ligase 0.96 BNILDI_18090 fnr fumarate/nitrate reduction transcriptional regulator Fnr low > 75
Escherichia fergusonii Becca 0.43 EFB2_03473 [Citrate [pro-3S]-lyase] ligase 0.96 EFB2_02593 Fumarate and nitrate reduction regulatory protein low > 86
Escherichia coli ECRC98 0.42 JDDGAC_11090 citC [citrate (pro-3S)-lyase] ligase 0.95 JDDGAC_04785 fnr fumarate/nitrate reduction transcriptional regulator Fnr low > 86
Escherichia coli ECRC99 0.42 KEDOAH_20525 citC [citrate (pro-3S)-lyase] ligase 0.96 KEDOAH_26530 fnr fumarate/nitrate reduction transcriptional regulator Fnr — —
Escherichia coli ECRC101 0.42 MCAODC_26660 citC [citrate (pro-3S)-lyase] ligase 0.95 MCAODC_16030 fnr fumarate/nitrate reduction transcriptional regulator Fnr low > 87
Vibrio cholerae E7946 ATCC 55056 0.42 CSW01_04115 [citrate (pro-3S)-lyase] ligase 0.86 CSW01_07190 transcriptional regulator FNR low > 62
Klebsiella michiganensis M5al 0.42 BWI76_RS04435 [citrate (pro-3S)-lyase] ligase 0.95 BWI76_RS16185 transcriptional regulator FNR — —
Escherichia coli ECRC102 0.42 NIAGMN_05500 citC [citrate (pro-3S)-lyase] ligase 0.96 NIAGMN_26410 fnr fumarate/nitrate reduction transcriptional regulator Fnr — —
Escherichia coli ECRC100 0.42 OKFHMN_07445 citC [citrate (pro-3S)-lyase] ligase 0.96 OKFHMN_02240 fnr fumarate/nitrate reduction transcriptional regulator Fnr low > 80
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.42 GFF222 [Citrate [pro-3S]-lyase] ligase (EC 6.2.1.22) 0.96 GFF2656 Fumarate and nitrate reduction regulatory protein low > 78
Serratia liquefaciens MT49 0.40 IAI46_17005 [citrate (pro-3S)-lyase] ligase 0.94 IAI46_13260 FNR family transcription factor low > 86

Not shown: 2 genomes with orthologs for HER17_RS12180 only; 54 genomes with orthologs for HER17_RS10525 only