Conservation of cofitness between HER17_RS15240 and HER17_RS06330 in Pectobacterium carotovorum WPP14

24 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pectobacterium carotovorum WPP14 1.0 HER17_RS15240 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH 1.0 HER17_RS06330 NupC/NupG family nucleoside CNT transporter 0.59 6
Dickeya dianthicola ME23 0.98 DZA65_RS06565 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH 0.86 DZA65_RS16155 NupC/NupG family nucleoside CNT transporter low > 75
Dickeya dadantii 3937 0.98 DDA3937_RS06175 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH 0.86 DDA3937_RS15255 NupC/NupG family nucleoside CNT transporter — —
Dickeya dianthicola 67-19 0.97 HGI48_RS06220 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH 0.86 HGI48_RS15335 NupC/NupG family nucleoside CNT transporter — —
Serratia liquefaciens MT49 0.95 IAI46_05935 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH 0.88 IAI46_18260 NupC/NupG family nucleoside CNT transporter low > 86
Rahnella sp. WP5 0.95 EX31_RS23125 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH 0.80 EX31_RS20080 NupC/NupG family nucleoside CNT transporter low > 89
Pantoea sp. MT58 0.92 IAI47_14020 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH 0.81 IAI47_05530 NupC/NupG family nucleoside CNT transporter low > 76
Enterobacter asburiae PDN3 0.91 EX28DRAFT_2327 rRNA large subunit m3Psi methyltransferase RlmH 0.80 EX28DRAFT_0231 nucleoside transporter — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.91 GFF4549 LSU m3Psi1915 methyltransferase RlmH 0.76 GFF1978 Nucleoside permease NupC low > 78
Escherichia coli HS(pFamp)R (ATCC 700891) 0.90 OHPLBJKB_03070 Ribosomal RNA large subunit methyltransferase H 0.79 OHPLBJKB_01329 Nucleoside permease NupC — —
Enterobacter sp. TBS_079 0.90 MPMX20_01295 Ribosomal RNA large subunit methyltransferase H 0.81 MPMX20_03287 Nucleoside permease NupC low > 85
Escherichia coli BW25113 0.90 b0636 ybeA hypothetical protein (NCBI) 0.79 b2393 nupC nucleoside (except guanosine) transporter (NCBI) low > 76
Escherichia coli Nissle 1917 0.90 ECOLIN_RS03465 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH 0.79 ECOLIN_RS13760 nucleoside permease NupC — —
Escherichia coli BL21 0.90 ECD_00605 23S rRNA m(3)Psi1915 pseudouridine methyltransferase, SAM-dependent 0.79 ECD_02302 nucleoside (except guanosine) transporter — —
Erwinia tracheiphila SCR3 0.90 LU632_RS16370 rlmH 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH 0.78 LU632_RS06530 NupC/NupG family nucleoside CNT transporter low > 74
Klebsiella michiganensis M5al 0.90 BWI76_RS08040 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH 0.80 BWI76_RS20540 NupC/NupG family nucleoside CNT transporter low > 92
Escherichia coli ECRC62 0.90 BNILDI_21745 rlmH 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH 0.79 BNILDI_12835 nupC nucleoside permease NupC — —
Escherichia coli ECRC102 0.90 NIAGMN_05415 rlmH 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH 0.79 NIAGMN_20075 nupC nucleoside permease NupC — —
Escherichia coli ECRC101 0.90 MCAODC_26575 rlmH 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH 0.79 MCAODC_12830 nupC nucleoside permease NupC low > 87
Escherichia coli ECOR27 0.90 NOLOHH_23735 rlmH 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH 0.79 NOLOHH_13985 nupC nucleoside permease NupC low > 75
Escherichia fergusonii Becca 0.90 EFB2_03456 Ribosomal RNA large subunit methyltransferase H 0.79 EFB2_01482 Nucleoside permease NupC low > 86
Escherichia coli ECRC100 0.90 OKFHMN_07360 rlmH 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH 0.79 OKFHMN_22300 nupC nucleoside permease NupC low > 80
Escherichia coli ECOR38 0.90 HEPCGN_00915 rlmH 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH 0.79 HEPCGN_21505 nupC nucleoside permease NupC low > 87
Escherichia coli ECRC98 0.90 JDDGAC_11005 rlmH 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH 0.79 JDDGAC_26265 nupC nucleoside permease NupC — —
Escherichia coli ECRC99 0.90 KEDOAH_20610 rlmH 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH 0.79 KEDOAH_05920 nupC nucleoside permease NupC — —

Not shown: 72 genomes with orthologs for HER17_RS15240 only; 0 genomes with orthologs for HER17_RS06330 only