Conservation of cofitness between HER17_RS12475 and HER17_RS06305 in Pectobacterium carotovorum WPP14

24 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pectobacterium carotovorum WPP14 1.0 HER17_RS12475 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC 1.0 HER17_RS06305 two-component system sensor histidine kinase BaeS 0.68 13
Dickeya dadantii 3937 0.79 DDA3937_RS09485 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC 0.73 DDA3937_RS15280 two-component system sensor histidine kinase BaeS low > 74
Dickeya dianthicola 67-19 0.79 HGI48_RS09505 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC 0.73 HGI48_RS15360 two-component system sensor histidine kinase BaeS low > 71
Dickeya dianthicola ME23 0.78 DZA65_RS09815 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC 0.73 DZA65_RS16180 two-component system sensor histidine kinase BaeS low > 75
Serratia liquefaciens MT49 0.78 IAI46_08395 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC 0.70 IAI46_18990 two-component system sensor histidine kinase BaeS low > 86
Rahnella sp. WP5 0.75 EX31_RS09605 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC 0.64 EX31_RS20310 two-component system sensor histidine kinase BaeS low > 89
Pantoea sp. MT58 0.74 IAI47_13020 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC 0.64 IAI47_06855 two-component system sensor histidine kinase BaeS low > 76
Escherichia coli ECRC62 0.73 BNILDI_20560 rlmC 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC 0.63 BNILDI_14440 baeS two-component system sensor histidine kinase BaeS low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 0.73 OHPLBJKB_02809 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC 0.63 OHPLBJKB_01626 Signal transduction histidine-protein kinase BaeS low > 73
Escherichia coli BL21 0.73 ECD_00864 23S rRNA m(5)U747 methyltransferase, SAM-dependent 0.63 ECD_01983 sensory histidine kinase in two-component regulatory system with BaeR low > 61
Enterobacter sp. TBS_079 0.73 MPMX20_01500 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC 0.63 MPMX20_03064 Signal transduction histidine-protein kinase BaeS low > 85
Escherichia coli ECOR38 0.73 HEPCGN_02095 rlmC 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC 0.63 HEPCGN_02870 baeS two-component system sensor histidine kinase BaeS low > 87
Escherichia coli ECRC102 0.73 NIAGMN_03980 rlmC 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC 0.63 NIAGMN_22125 baeS two-component system sensor histidine kinase BaeS — —
Escherichia coli ECRC99 0.73 KEDOAH_21975 rlmC 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC 0.63 KEDOAH_03970 baeS two-component system sensor histidine kinase BaeS — —
Escherichia coli Nissle 1917 0.73 ECOLIN_RS04575 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC 0.63 ECOLIN_RS12215 two-component system sensor histidine kinase BaeS — —
Escherichia fergusonii Becca 0.73 EFB2_03202 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC 0.63 EFB2_01777 Signal transduction histidine-protein kinase BaeS low > 86
Escherichia coli ECRC101 0.73 MCAODC_25150 rlmC 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC 0.63 MCAODC_20760 baeS two-component system sensor histidine kinase BaeS low > 87
Escherichia coli ECRC100 0.73 OKFHMN_05935 rlmC 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC 0.63 OKFHMN_24180 baeS two-component system sensor histidine kinase BaeS low > 80
Enterobacter asburiae PDN3 0.72 EX28DRAFT_2094 23S rRNA (uracil-5-)-methyltransferase RumB 0.63 EX28DRAFT_0480 Signal transduction histidine kinase low > 76
Escherichia coli ECRC98 0.72 JDDGAC_09570 rlmC 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC 0.63 JDDGAC_28290 baeS two-component system sensor histidine kinase BaeS low > 86
Escherichia coli BW25113 0.72 b0859 rumB 23S rRNA m(5)U747-methyltransferase (NCBI) 0.63 b2078 baeS sensory histidine kinase in two-component regulatory system with BaeR (NCBI) low > 76
Escherichia coli ECOR27 0.72 NOLOHH_22305 rlmC 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC 0.63 NOLOHH_15525 baeS two-component system sensor histidine kinase BaeS low > 75
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.71 GFF763 23S rRNA (Uracil-5-) -methyltransferase rumB (EC 2.1.1.-) 0.64 GFF3851 Sensory histidine kinase BaeS low > 78
Klebsiella michiganensis M5al 0.70 BWI76_RS09485 23S rRNA (uracil(747)-C(5))-methyltransferase 0.60 BWI76_RS19270 two-component sensor histidine kinase low > 92
Erwinia tracheiphila SCR3 0.65 LU632_RS09660 rlmC 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC 0.61 LU632_RS08675 baeS two-component system sensor histidine kinase BaeS low > 74

Not shown: 5 genomes with orthologs for HER17_RS12475 only; 18 genomes with orthologs for HER17_RS06305 only