Conservation of cofitness between HER17_RS12180 and HER17_RS05840 in Pectobacterium carotovorum WPP14

23 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pectobacterium carotovorum WPP14 1.0 HER17_RS12180 [citrate (pro-3S)-lyase] ligase 1.0 HER17_RS05840 YfhL family 4Fe-4S dicluster ferredoxin 0.69 16
Dickeya dadantii 3937 0.74 DDA3937_RS07825 [citrate (pro-3S)-lyase] ligase 0.83 DDA3937_RS15710 YfhL family 4Fe-4S dicluster ferredoxin low > 74
Dickeya dianthicola 67-19 0.71 HGI48_RS09790 [citrate (pro-3S)-lyase] ligase 0.83 HGI48_RS15795 YfhL family 4Fe-4S dicluster ferredoxin low > 71
Dickeya dianthicola ME23 0.70 DZA65_RS10100 [citrate (pro-3S)-lyase] ligase 0.83 DZA65_RS16875 YfhL family 4Fe-4S dicluster ferredoxin low > 75
Rahnella sp. WP5 0.57 EX31_RS17785 [citrate (pro-3S)-lyase] ligase 0.80 EX31_RS21860 YfhL family 4Fe-4S dicluster ferredoxin low > 89
Enterobacter sp. TBS_079 0.49 MPMX20_03827 [Citrate [pro-3S]-lyase] ligase 0.83 MPMX20_03433 Ferredoxin YfhL low > 85
Enterobacter asburiae PDN3 0.48 EX28DRAFT_3007 [citrate (pro-3S)-lyase] ligase 0.83 EX28DRAFT_0084 4Fe-4S dicluster domain low > 76
Escherichia coli ECOR38 0.43 HEPCGN_00830 citC [citrate (pro-3S)-lyase] ligase 0.83 HEPCGN_20590 yfhL 4Fe-4S dicluster ferredoxin YfhL low > 87
Escherichia coli HS(pFamp)R (ATCC 700891) 0.43 OHPLBJKB_03087 [Citrate [pro-3S]-lyase] ligase 0.83 OHPLBJKB_01145 Ferredoxin YfhL low > 73
Escherichia coli Nissle 1917 0.43 ECOLIN_RS03375 [citrate (pro-3S)-lyase] ligase 0.83 ECOLIN_RS14495 4Fe-4S dicluster ferredoxin YfhL — —
Escherichia coli ECOR27 0.43 NOLOHH_23820 citC [citrate (pro-3S)-lyase] ligase 0.83 NOLOHH_13120 yfhL 4Fe-4S dicluster ferredoxin YfhL low > 75
Escherichia coli ECRC62 0.43 BNILDI_21830 citC [citrate (pro-3S)-lyase] ligase 0.83 BNILDI_11920 yfhL 4Fe-4S dicluster ferredoxin YfhL low > 75
Escherichia coli BW25113 0.43 b0618 citC citrate lyase synthetase (citrate (pro-3S)-lyase ligase (VIMSS) 0.83 b2562 yfhL predicted 4Fe-4S cluster-containing protein (NCBI) low > 76
Escherichia fergusonii Becca 0.43 EFB2_03473 [Citrate [pro-3S]-lyase] ligase 0.83 EFB2_01334 Ferredoxin YfhL low > 86
Escherichia coli BL21 0.42 ECD_00586 citrate lyase ligase; [citrate [pro-3S]-lyase] ligase 0.83 ECD_02456 putative 4Fe-4S cluster-containing protein low > 61
Escherichia coli ECRC101 0.42 MCAODC_26660 citC [citrate (pro-3S)-lyase] ligase 0.83 MCAODC_11975 yfhL 4Fe-4S dicluster ferredoxin YfhL low > 87
Escherichia coli ECRC98 0.42 JDDGAC_11090 citC [citrate (pro-3S)-lyase] ligase 0.83 JDDGAC_25110 yfhL 4Fe-4S dicluster ferredoxin YfhL low > 86
Escherichia coli ECRC99 0.42 KEDOAH_20525 citC [citrate (pro-3S)-lyase] ligase 0.83 KEDOAH_06775 yfhL 4Fe-4S dicluster ferredoxin YfhL — —
Vibrio cholerae E7946 ATCC 55056 0.42 CSW01_04115 [citrate (pro-3S)-lyase] ligase 0.67 CSW01_03745 ferredoxin low > 62
Klebsiella michiganensis M5al 0.42 BWI76_RS04435 [citrate (pro-3S)-lyase] ligase 0.81 BWI76_RS21295 ferredoxin — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.42 GFF222 [Citrate [pro-3S]-lyase] ligase (EC 6.2.1.22) 0.82 GFF2470 4Fe-4S ferredoxin, iron-sulfur binding low > 78
Escherichia coli ECRC102 0.42 NIAGMN_05500 citC [citrate (pro-3S)-lyase] ligase 0.83 NIAGMN_19215 yfhL 4Fe-4S dicluster ferredoxin YfhL — —
Escherichia coli ECRC100 0.42 OKFHMN_07445 citC [citrate (pro-3S)-lyase] ligase 0.83 OKFHMN_21445 yfhL 4Fe-4S dicluster ferredoxin YfhL low > 80
Serratia liquefaciens MT49 0.40 IAI46_17005 [citrate (pro-3S)-lyase] ligase 0.83 IAI46_19525 YfhL family 4Fe-4S dicluster ferredoxin low > 86

Not shown: 2 genomes with orthologs for HER17_RS12180 only; 46 genomes with orthologs for HER17_RS05840 only