Conservation of cofitness between HER17_RS21350 and HER17_RS05605 in Pectobacterium carotovorum WPP14

22 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pectobacterium carotovorum WPP14 1.0 HER17_RS21350 EAL domain-containing protein 1.0 HER17_RS05605 Fe3+-hydroxamate ABC transporter ATP-binding protein FhuC 0.71 1
Pantoea sp. MT58 0.45 IAI47_01435 EAL domain-containing protein 0.76 IAI47_15605 Fe3+-hydroxamate ABC transporter ATP-binding protein FhuC low > 76
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.31 GFF4237 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) 0.80 GFF80 Ferric hydroxamate ABC transporter (TC 3.A.1.14.3), ATP-binding protein FhuC low > 78
Escherichia coli ECRC101 0.30 MCAODC_23905 eAL EAL domain, c-di-GMP-specific phosphodiesterase class I (or its enzymatically inactive variant) 0.80 MCAODC_00830 fhuC Fe3+-hydroxamate ABC transporter ATP-binding protein FhuC low > 87
Escherichia coli ECRC102 0.30 NIAGMN_23805 eAL EAL domain, c-di-GMP-specific phosphodiesterase class I (or its enzymatically inactive variant) 0.80 NIAGMN_08165 fhuC Fe3+-hydroxamate ABC transporter ATP-binding protein FhuC — —
Escherichia coli ECRC98 0.30 JDDGAC_08140 eAL EAL domain, c-di-GMP-specific phosphodiesterase class I (or its enzymatically inactive variant) 0.80 JDDGAC_13910 fhuC Fe3+-hydroxamate ABC transporter ATP-binding protein FhuC low > 86
Escherichia coli ECRC99 0.30 KEDOAH_23215 eAL EAL domain, c-di-GMP-specific phosphodiesterase class I (or its enzymatically inactive variant) 0.80 KEDOAH_17840 fhuC Fe3+-hydroxamate ABC transporter ATP-binding protein FhuC — —
Escherichia coli ECRC100 0.30 OKFHMN_04530 eAL EAL domain, c-di-GMP-specific phosphodiesterase class I (or its enzymatically inactive variant) 0.80 OKFHMN_10315 fhuC Fe3+-hydroxamate ABC transporter ATP-binding protein FhuC — —
Enterobacter sp. TBS_079 0.21 MPMX20_02720 putative cyclic di-GMP phosphodiesterase PdeD 0.80 MPMX20_00837 Iron(3+)-hydroxamate import ATP-binding protein FhuC low > 85
Klebsiella michiganensis M5al 0.21 BWI76_RS17880 c-di-GMP phosphodiesterase 0.80 BWI76_RS05130 iron-hydroxamate transporter ATP-binding subunit low > 92
Enterobacter asburiae PDN3 0.20 EX28DRAFT_1790 FOG: EAL domain 0.80 EX28DRAFT_3740 ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components low > 76
Serratia liquefaciens MT49 0.20 IAI46_14800 EAL domain-containing protein 0.84 IAI46_21180 Fe3+-hydroxamate ABC transporter ATP-binding protein FhuC low > 86
Escherichia fergusonii Becca 0.20 EFB2_01680 putative cyclic di-GMP phosphodiesterase PdeN 0.80 EFB2_03893 Iron(3+)-hydroxamate import ATP-binding protein FhuC low > 86
Escherichia coli BW25113 0.20 b2176 rtn hypothetical protein (NCBI) 0.80 b0151 fhuC iron-hydroxamate transporter subunit (NCBI) low > 76
Escherichia coli ECOR38 0.20 HEPCGN_22660 pdeN cyclic di-GMP phosphodiesterase 0.80 HEPCGN_08265 fhuC Fe3+-hydroxamate ABC transporter ATP-binding protein FhuC low > 87
Escherichia coli ECRC62 0.20 BNILDI_13890 pdeN cyclic di-GMP phosphodiesterase 0.80 BNILDI_09010 fhuC Fe3+-hydroxamate ABC transporter ATP-binding protein FhuC low > 75
Escherichia coli ECOR27 0.20 NOLOHH_14970 pdeN cyclic di-GMP phosphodiesterase 0.80 NOLOHH_02660 fhuC Fe3+-hydroxamate ABC transporter ATP-binding protein FhuC low > 75
Escherichia coli Nissle 1917 0.20 ECOLIN_RS12725 cyclic di-GMP phosphodiesterase 0.80 ECOLIN_RS00845 Fe3+-hydroxamate ABC transporter ATP-binding protein FhuC low > 55
Escherichia coli HS(pFamp)R (ATCC 700891) 0.20 OHPLBJKB_01533 putative cyclic di-GMP phosphodiesterase PdeN 0.80 OHPLBJKB_03511 Iron(3+)-hydroxamate import ATP-binding protein FhuC low > 73
Escherichia coli BL21 0.20 ECD_02106 resistance protein for phages lambda and N4, putative membrane-anchored cyclic-di-GMP phosphodiesterase 0.80 ECD_00150 iron(3+)-hydroxamate import ABC transporter ATPase low > 61
Dickeya dadantii 3937 0.18 DDA3937_RS13005 EAL domain-containing protein 0.80 DDA3937_RS15910 Fe3+-hydroxamate ABC transporter ATP-binding protein FhuC low > 74
Erwinia tracheiphila SCR3 0.17 LU632_RS13190 cyclic diguanylate phosphodiesterase 0.72 LU632_RS20055 fhuC Fe3+-hydroxamate ABC transporter ATP-binding protein FhuC low > 74
Paraburkholderia bryophila 376MFSha3.1 0.16 H281DRAFT_06460 diguanylate phosphodiesterase 0.62 H281DRAFT_04927 iron complex transport system ATP-binding protein — —

Not shown: 14 genomes with orthologs for HER17_RS21350 only; 15 genomes with orthologs for HER17_RS05605 only