Conservation of cofitness between HER17_RS14245 and HER17_RS05500 in Pectobacterium carotovorum WPP14

24 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pectobacterium carotovorum WPP14 1.0 HER17_RS14245 response regulator transcription factor 1.0 HER17_RS05500 adenosylmethionine decarboxylase 0.60 4
Klebsiella michiganensis M5al 0.71 BWI76_RS06060 DNA-binding response regulator 0.87 BWI76_RS04920 S-adenosylmethionine decarboxylase low > 92
Escherichia coli ECRC99 0.69 KEDOAH_19265 citB DNA-binding response regulator 0.87 KEDOAH_17685 speD adenosylmethionine decarboxylase — —
Escherichia coli ECRC102 0.69 NIAGMN_06760 citB DNA-binding response regulator 0.87 NIAGMN_08320 speD adenosylmethionine decarboxylase — —
Escherichia coli ECRC98 0.69 JDDGAC_12360 citB DNA-binding response regulator 0.87 JDDGAC_14065 speD adenosylmethionine decarboxylase 0.53 77
Escherichia coli ECRC101 0.69 MCAODC_27935 citB DNA-binding response regulator 0.87 MCAODC_00985 speD adenosylmethionine decarboxylase low > 87
Escherichia coli ECRC100 0.69 OKFHMN_08705 citB DNA-binding response regulator 0.87 OKFHMN_10470 speD adenosylmethionine decarboxylase low > 80
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.42 GFF304 Transcriptional regulatory protein UhpA 0.87 GFF108 S-adenosylmethionine decarboxylase proenzyme (EC 4.1.1.50), prokaryotic class 1A low > 78
Enterobacter asburiae PDN3 0.42 EX28DRAFT_3952 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain 0.88 EX28DRAFT_3717 S-adenosylmethionine decarboxylase proenzyme, Escherichia coli form low > 76
Enterobacter sp. TBS_079 0.41 MPMX20_00033 Transcriptional regulatory protein UhpA 0.88 MPMX20_00814 S-adenosylmethionine decarboxylase proenzyme low > 85
Escherichia fergusonii Becca 0.41 EFB2_00029 Transcriptional regulatory protein UhpA 0.88 EFB2_03925 S-adenosylmethionine decarboxylase proenzyme low > 86
Escherichia coli BW25113 0.41 b3669 uhpA DNA-binding response regulator in two-component regulatory system wtih UhpB (NCBI) 0.88 b0120 speD S-adenosylmethionine decarboxylase proenzyme (NCBI) low > 76
Escherichia coli ECRC62 0.41 BNILDI_04190 uhpA_G97D DNA-binding response regulator UhpA 0.87 BNILDI_08795 speD adenosylmethionine decarboxylase low > 75
Escherichia coli ECOR27 0.41 NOLOHH_07335 uhpA_G97D DNA-binding response regulator UhpA 0.87 NOLOHH_02815 speD adenosylmethionine decarboxylase low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 0.41 OHPLBJKB_00031 Transcriptional regulatory protein UhpA 0.88 OHPLBJKB_03541 S-adenosylmethionine decarboxylase proenzyme low > 73
Escherichia coli BL21 0.41 ECD_03553 response regulator in two-component regulatory system wtih UhpB 0.88 ECD_00119 S-adenosylmethionine decarboxylase low > 61
Escherichia coli Nissle 1917 0.41 ECOLIN_RS21160 transcriptional regulator UhpA 0.88 ECOLIN_RS00670 adenosylmethionine decarboxylase low > 55
Escherichia coli ECOR38 0.41 HEPCGN_13905 uhpA_G97D DNA-binding response regulator UhpA 0.87 HEPCGN_08450 speD adenosylmethionine decarboxylase low > 87
Dickeya dianthicola 67-19 0.41 HGI48_RS02840 transcriptional regulator UhpA 0.93 HGI48_RS16135 adenosylmethionine decarboxylase low > 71
Dickeya dadantii 3937 0.41 DDA3937_RS02865 transcriptional regulator UhpA 0.93 DDA3937_RS16015 adenosylmethionine decarboxylase low > 74
Dickeya dianthicola ME23 0.41 DZA65_RS03015 transcriptional regulator UhpA 0.93 DZA65_RS17220 adenosylmethionine decarboxylase low > 75
Serratia liquefaciens MT49 0.40 IAI46_00435 transcriptional regulator UhpA 0.93 IAI46_21295 adenosylmethionine decarboxylase low > 86
Dyella japonica UNC79MFTsu3.2 0.34 ABZR86_RS05670 response regulator transcription factor 0.63 ABZR86_RS12040 adenosylmethionine decarboxylase — —
Rhodanobacter sp. FW510-T8 0.32 OKGIIK_07345 citB DNA-binding response regulator 0.64 OKGIIK_12265 speD adenosylmethionine decarboxylase — —
Xanthomonas campestris pv. campestris strain 8004 0.28 Xcc-8004.4961.1 Two-component system regulatory protein 0.66 Xcc-8004.625.1 S-adenosylmethionine decarboxylase proenzyme (EC 4.1.1.50), prokaryotic class 1A — —

Not shown: 15 genomes with orthologs for HER17_RS14245 only; 12 genomes with orthologs for HER17_RS05500 only