Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
Escherichia coli ECOR38 | 1.0 | HEPCGN_13260 | rffC | dTDP-4-amino-4,6-dideoxy-D-galactose acyltransferase | 1.0 | HEPCGN_23865 | rluC | 23S rRNA pseudouridine(955/2504/2580) synthase RluC | 0.97 | 6 |
Escherichia coli BL21 | 1.00 | ECD_03668 | | TDP-fucosamine acetyltransferase | 1.00 | ECD_01082 | | 23S rRNA pseudouridine(955,2504,2580) synthase | low | > 61 |
Escherichia coli ECRC98 | 1.00 | JDDGAC_18175 | rffC | dTDP-4-amino-4,6-dideoxy-D-galactose acyltransferase | 1.00 | JDDGAC_07275 | rluC | 23S rRNA pseudouridine(955/2504/2580) synthase RluC | low | > 86 |
Escherichia coli BW25113 | 1.00 | b3790 | rffC | TDP-fucosamine acetyltransferase (RefSeq) | 1.00 | b1086 | rluC | 23S rRNA pseudouridylate synthase (NCBI) | low | > 76 |
Escherichia coli ECRC99 | 1.00 | KEDOAH_13600 | rffC | dTDP-4-amino-4,6-dideoxy-D-galactose acyltransferase | 1.00 | KEDOAH_24140 | rluC | 23S rRNA pseudouridine(955/2504/2580) synthase RluC | — | — |
Escherichia coli ECRC102 | 1.00 | NIAGMN_12305 | rffC | dTDP-4-amino-4,6-dideoxy-D-galactose acyltransferase | 1.00 | NIAGMN_24215 | rluC | 23S rRNA pseudouridine(955/2504/2580) synthase RluC | — | — |
Escherichia coli HS(pFamp)R (ATCC 700891) | 1.00 | OHPLBJKB_04264 | | dTDP-fucosamine acetyltransferase | 1.00 | OHPLBJKB_02580 | | Ribosomal large subunit pseudouridine synthase C | low | > 73 |
Escherichia coli ECRC100 | 1.00 | OKFHMN_14550 | rffC | dTDP-4-amino-4,6-dideoxy-D-galactose acyltransferase | 1.00 | OKFHMN_03615 | rluC | 23S rRNA pseudouridine(955/2504/2580) synthase RluC | 0.82 | 45 |
Escherichia coli ECRC101 | 1.00 | MCAODC_05055 | rffC | dTDP-4-amino-4,6-dideoxy-D-galactose acyltransferase | 1.00 | MCAODC_22975 | rluC | 23S rRNA pseudouridine(955/2504/2580) synthase RluC | low | > 87 |
Escherichia fergusonii Becca | 0.99 | EFB2_04849 | | dTDP-fucosamine acetyltransferase | 1.00 | EFB2_02889 | | Ribosomal large subunit pseudouridine synthase C | low | > 86 |
Escherichia coli Nissle 1917 | 0.99 | ECOLIN_RS21755 | | dTDP-4-amino-4,6-dideoxy-D-galactose acyltransferase | 1.00 | ECOLIN_RS06280 | | 23S rRNA pseudouridine(955/2504/2580) synthase RluC | — | — |
Escherichia coli ECRC62 | 0.99 | BNILDI_04840 | rffC | dTDP-4-amino-4,6-dideoxy-D-galactose acyltransferase | 1.00 | BNILDI_19305 | rluC | 23S rRNA pseudouridine(955/2504/2580) synthase RluC | low | > 75 |
Escherichia coli ECOR27 | 0.98 | NOLOHH_06685 | rffC | dTDP-4-amino-4,6-dideoxy-D-galactose acyltransferase | 1.00 | NOLOHH_21145 | rluC | 23S rRNA pseudouridine(955/2504/2580) synthase RluC | 0.75 | 37 |
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.79 | GFF2883 | | Lipopolysaccharide biosynthesis protein RffC | 0.98 | GFF3366 | | Ribosomal large subunit pseudouridine synthase C (EC 4.2.1.70) | — | — |
Klebsiella michiganensis M5al | 0.74 | BWI76_RS01110 | | TDP-fucosamine acetyltransferase | 0.93 | BWI76_RS11050 | | 23S rRNA pseudouridine(955/2504/2580) synthase | low | > 92 |
Enterobacter asburiae PDN3 | 0.66 | EX28DRAFT_4458 | | TDP-D-fucosamine acetyltransferase | 0.92 | EX28DRAFT_1844 | | pseudouridine synthase, RluA family | — | — |
Enterobacter sp. TBS_079 | 0.65 | MPMX20_04485 | | dTDP-fucosamine acetyltransferase | 0.89 | MPMX20_01766 | | Ribosomal large subunit pseudouridine synthase C | low | > 85 |
Pectobacterium carotovorum WPP14 | 0.53 | HER17_RS01170 | | dTDP-4-amino-4,6-dideoxy-D-galactose acyltransferase | 0.81 | HER17_RS08615 | | 23S rRNA pseudouridine(955/2504/2580) synthase RluC | low | > 75 |
Pantoea sp. MT58 | 0.50 | IAI47_18490 | | dTDP-4-amino-4,6-dideoxy-D-galactose acyltransferase | 0.85 | IAI47_12105 | | 23S rRNA pseudouridine(955/2504/2580) synthase RluC | 0.39 | 76 |
Erwinia tracheiphila SCR3 | 0.46 | LU632_RS24230 | rffC | dTDP-4-amino-4,6-dideoxy-D-galactose acyltransferase | 0.85 | LU632_RS14855 | rluC | 23S rRNA pseudouridine(955/2504/2580) synthase RluC | low | > 74 |
Dickeya dianthicola ME23 | 0.45 | DZA65_RS21235 | | dTDP-4-amino-4,6-dideoxy-D-galactose acyltransferase | 0.80 | DZA65_RS13690 | | 23S rRNA pseudouridine(955/2504/2580) synthase RluC | low | > 75 |
Serratia liquefaciens MT49 | 0.45 | IAI46_00620 | | dTDP-4-amino-4,6-dideoxy-D-galactose acyltransferase | 0.80 | IAI46_09755 | | 23S rRNA pseudouridine(955/2504/2580) synthase RluC | low | > 86 |
Dickeya dianthicola 67-19 | 0.44 | HGI48_RS20190 | | dTDP-4-amino-4,6-dideoxy-D-galactose acyltransferase | 0.80 | HGI48_RS13220 | | 23S rRNA pseudouridine(955/2504/2580) synthase RluC | low | > 71 |
Dickeya dadantii 3937 | 0.44 | DDA3937_RS20045 | | dTDP-4-amino-4,6-dideoxy-D-galactose acyltransferase | 0.80 | DDA3937_RS13155 | | 23S rRNA pseudouridine(955/2504/2580) synthase RluC | low | > 74 |
Rahnella sp. WP5 | 0.43 | EX31_RS15075 | | dTDP-4-amino-4,6-dideoxy-D-galactose acyltransferase | 0.82 | EX31_RS24400 | | 23S rRNA pseudouridine(955/2504/2580) synthase RluC | low | > 89 |
Not shown: 0 genomes with orthologs for HEPCGN_13260 only; 57 genomes with orthologs for HEPCGN_23865 only