Conservation of cofitness between HEPCGN_26730 and HEPCGN_16585 in Escherichia coli ECOR38

18 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli ECOR38 1.0 HEPCGN_26730 baseplate assembly protein 1.0 HEPCGN_16585 csrD RNase E specificity factor CsrD 0.51 13
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_02832 hypothetical protein 0.99 OHPLBJKB_00453 RNase E specificity factor CsrD low > 73
Escherichia coli BL21 0.99 ECD_00843 phage baseplate assembly protein 0.99 ECD_03111 targeting factor for csrBC sRNA degradation low > 61
Escherichia fergusonii Becca 0.98 EFB2_03228 hypothetical protein 0.99 EFB2_00579 RNase E specificity factor CsrD low > 86
Rahnella sp. WP5 0.72 EX31_RS07660 baseplate assembly protein 0.49 EX31_RS12230 RNase E specificity factor CsrD low > 89
Dickeya dianthicola 67-19 0.70 HGI48_RS03040 baseplate assembly protein 0.52 HGI48_RS01345 RNase E specificity factor CsrD low > 71
Erwinia tracheiphila SCR3 0.69 LU632_RS03630 baseplate assembly protein 0.51 LU632_RS21455 csrD RNase E specificity factor CsrD low > 74
Enterobacter asburiae PDN3 0.69 EX28DRAFT_3118 Phage-related baseplate assembly protein 0.79 EX28DRAFT_3302 diguanylate cyclase (GGDEF) domain low > 76
Escherichia coli ECRC101 0.68 MCAODC_20850 Baseplate protein J 0.99 MCAODC_08240 csrD RNase E specificity factor CsrD low > 87
Klebsiella michiganensis M5al 0.68 BWI76_RS09340 baseplate assembly protein J 0.76 BWI76_RS25505 RNase E specificity factor CsrD low > 92
Escherichia coli ECRC98 0.68 JDDGAC_09185 Baseplate protein J 0.99 JDDGAC_21345 csrD RNase E specificity factor CsrD low > 86
Enterobacter sp. TBS_079 0.68 MPMX20_03962 hypothetical protein 0.79 MPMX20_04158 RNase E specificity factor CsrD low > 85
Dickeya dadantii 3937 0.68 DDA3937_RS12060 baseplate assembly protein 0.51 DDA3937_RS01425 RNase E specificity factor CsrD low > 74
Dickeya dianthicola ME23 0.66 DZA65_RS12600 baseplate assembly protein 0.52 DZA65_RS01405 RNase E specificity factor CsrD low > 75
Pectobacterium carotovorum WPP14 0.65 HER17_RS07800 baseplate assembly protein 0.52 HER17_RS20175 RNase E specificity factor CsrD low > 75
Pseudomonas fluorescens FW300-N2C3 0.47 AO356_02040 baseplate assembly protein 0.09 AO356_10580 hypothetical protein low > 104
Pseudomonas sp. RS175 0.47 PFR28_01172 hypothetical protein 0.08 PFR28_04783 hypothetical protein low > 88
Pseudomonas fluorescens FW300-N2E3 0.39 AO353_27305 baseplate assembly protein 0.09 AO353_11170 hypothetical protein low > 101
Pseudomonas putida KT2440 0.32 PP_3054 Pyocin R2_PP, baseplate/tail fiber protein 0.07 PP_0165 GGDEF domain protein low > 96

Not shown: 14 genomes with orthologs for HEPCGN_26730 only; 16 genomes with orthologs for HEPCGN_16585 only