Conservation of cofitness between HEPCGN_05335 and HEPCGN_16350 in Escherichia coli ECOR38

22 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli ECOR38 1.0 HEPCGN_05335 chbA PTS N,N'-diacetylchitobiose transporter subunit IIA 1.0 HEPCGN_16350 rsmB 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB 0.55 16
Escherichia fergusonii Becca 1.00 EFB2_02257 PTS system N,N'-diacetylchitobiose-specific EIIA component 1.00 EFB2_00535 Ribosomal RNA small subunit methyltransferase B low > 86
Escherichia coli ECRC100 1.00 OKFHMN_26970 chbA PTS N,N'-diacetylchitobiose transporter subunit IIA 0.99 OKFHMN_17520 rsmB 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB low > 80
Escherichia coli Nissle 1917 1.00 ECOLIN_RS09680 PTS N,N'-diacetylchitobiose transporter subunit IIA 1.00 ECOLIN_RS18875 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB
Escherichia coli ECRC102 1.00 NIAGMN_01095 chbA PTS N,N'-diacetylchitobiose transporter subunit IIA 0.99 NIAGMN_15290 rsmB 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB
Escherichia coli BL21 1.00 ECD_01705 N,N'-diacetylchitobiose-specific enzyme IIA component of PTS 0.99 ECD_03139 16S rRNA m(5)C967 methyltransferase, SAM-dependent
Escherichia coli ECRC101 1.00 MCAODC_18440 chbA PTS N,N'-diacetylchitobiose transporter subunit IIA 0.99 MCAODC_08050 rsmB 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB low > 87
Escherichia coli ECOR27 1.00 NOLOHH_17485 chbA PTS N,N'-diacetylchitobiose transporter subunit IIA 0.99 NOLOHH_09320 rsmB 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB
Escherichia coli ECRC98 1.00 JDDGAC_01545 chbA PTS N,N'-diacetylchitobiose transporter subunit IIA 0.99 JDDGAC_21150 rsmB 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB
Escherichia coli BW25113 1.00 b1736 chbA N,N'-diacetylchitobiose-specific enzyme IIA component of PTS (NCBI) 0.99 b3289 rsmB 16S rRNA m5C967 methyltransferase, S-adenosyl-L-methionine-dependent (NCBI)
Escherichia coli ECRC62 1.00 BNILDI_16270 chbA PTS N,N'-diacetylchitobiose transporter subunit IIA 0.99 BNILDI_02200 rsmB 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB low > 75
Escherichia coli ECRC99 1.00 KEDOAH_01140 chbA PTS N,N'-diacetylchitobiose transporter subunit IIA 0.99 KEDOAH_10620 rsmB 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_01996 'PTS system N,N'-diacetylchitobiose-specific EIIA component' transl_table=11 0.99 OHPLBJKB_00415 Ribosomal RNA small subunit methyltransferase B low > 73
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.88 GFF3504 PTS system, cellobiose-specific IIA component (EC 2.7.1.69) 0.90 GFF2390 16S rRNA (cytosine(967)-C(5))-methyltransferase (EC 2.1.1.176) ## SSU rRNA m5C967 low > 78
Klebsiella michiganensis M5al 0.83 BWI76_RS11735 PTS N,N'-diacetylchitobiose transporter subunit IIA 0.90 BWI76_RS25680 16S rRNA m5C967 methyltransferase low > 92
Enterobacter asburiae PDN3 0.83 EX28DRAFT_1740 Phosphotransferase system cellobiose-specific component IIA 0.87 EX28DRAFT_0039 16S rRNA (cytosine(967)-C(5))-methyltransferase low > 76
Enterobacter sp. TBS_079 0.83 MPMX20_01878 PTS system N,N'-diacetylchitobiose-specific EIIA component 0.86 MPMX20_04196 Ribosomal RNA small subunit methyltransferase B low > 85
Rahnella sp. WP5 0.82 EX31_RS02275 PTS N,N'-diacetylchitobiose transporter subunit IIA 0.71 EX31_RS15985 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB
Dickeya dianthicola 67-19 0.47 HGI48_RS15940 PTS lactose/cellobiose transporter subunit IIA 0.73 HGI48_RS19225 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB low > 71
Dickeya dianthicola ME23 0.47 DZA65_RS17015 PTS lactose/cellobiose transporter subunit IIA 0.73 DZA65_RS20350 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB low > 75
Vibrio cholerae E7946 ATCC 55056 0.47 CSW01_06485 PTS lactose/cellobiose transporter subunit IIA 0.60 CSW01_00225 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB low > 62
Pectobacterium carotovorum WPP14 0.43 HER17_RS11830 PTS lactose/cellobiose transporter subunit IIA 0.73 HER17_RS02215 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB low > 75
Serratia liquefaciens MT49 0.40 IAI46_09250 PTS lactose/cellobiose transporter subunit IIA 0.74 IAI46_23275 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB

Not shown: 0 genomes with orthologs for HEPCGN_05335 only; 63 genomes with orthologs for HEPCGN_16350 only