Conservation of cofitness between HEPCGN_04450 and HEPCGN_08080 in Escherichia coli ECOR38

18 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli ECOR38 1.0 HEPCGN_04450 yecA UPF0149 family protein YecA 1.0 HEPCGN_08080 ldcC lysine decarboxylase LdcC 0.52 18
Escherichia coli ECRC100 1.00 OKFHMN_26030 yecA UPF0149 family protein YecA 0.99 OKFHMN_10125 ldcC lysine decarboxylase LdcC low > 80
Escherichia coli ECRC98 1.00 JDDGAC_00605 yecA UPF0149 family protein YecA 0.99 JDDGAC_13720 ldcC lysine decarboxylase LdcC low > 86
Escherichia coli ECRC101 1.00 MCAODC_19375 yecA UPF0149 family protein YecA 0.99 MCAODC_00640 ldcC lysine decarboxylase LdcC low > 87
Escherichia coli Nissle 1917 1.00 ECOLIN_RS10870 UPF0149 family protein YecA 0.99 ECOLIN_RS01010 lysine decarboxylase LdcC — —
Escherichia fergusonii Becca 1.00 EFB2_02038 hypothetical protein 0.99 EFB2_03858 Constitutive lysine decarboxylase 0.31 20
Escherichia coli ECRC102 1.00 NIAGMN_02035 yecA UPF0149 family protein YecA 0.99 NIAGMN_07975 ldcC lysine decarboxylase LdcC — —
Escherichia coli ECRC99 1.00 KEDOAH_02075 yecA UPF0149 family protein YecA 0.99 KEDOAH_18030 ldcC lysine decarboxylase LdcC — —
Escherichia coli ECRC62 1.00 BNILDI_15260 yecA UPF0149 family protein YecA 0.99 BNILDI_09200 ldcC lysine decarboxylase LdcC low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_01821 hypothetical protein 0.99 OHPLBJKB_03477 Constitutive lysine decarboxylase low > 73
Escherichia coli BW25113 1.00 b1908 yecA conserved metal-binding protein (NCBI) 0.99 b0186 ldcC lysine decarboxylase 2, constitutive (NCBI) low > 76
Escherichia coli ECOR27 1.00 NOLOHH_16470 yecA UPF0149 family protein YecA 0.99 NOLOHH_02470 ldcC lysine decarboxylase LdcC 0.51 44
Escherichia coli BL21 1.00 ECD_01876 UPF0149 family protein 0.99 ECD_00184 lysine decarboxylase 2, constitutive low > 61
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.84 GFF1684 FIG00637942: hypothetical protein 0.92 GFF35 Lysine decarboxylase 2, constitutive (EC 4.1.1.18) low > 78
Klebsiella michiganensis M5al 0.72 BWI76_RS18300 hypothetical protein 0.89 BWI76_RS05300 lysine decarboxylase LdcC low > 92
Pantoea sp. MT58 0.71 IAI47_16480 YecA family protein 0.84 IAI47_15445 lysine decarboxylase LdcC low > 76
Enterobacter asburiae PDN3 0.64 EX28DRAFT_0644 yecA family protein 0.90 EX28DRAFT_3774 Arginine/lysine/ornithine decarboxylases low > 76
Enterobacter sp. TBS_079 0.64 MPMX20_02819 hypothetical protein 0.90 MPMX20_00870 Constitutive lysine decarboxylase low > 85
Herbaspirillum seropedicae SmR1 0.27 HSERO_RS07215 preprotein translocase 0.34 HSERO_RS17280 lysine decarboxylase — —

Not shown: 12 genomes with orthologs for HEPCGN_04450 only; 4 genomes with orthologs for HEPCGN_08080 only