Conservation of cofitness between HEPCGN_17305 and HEPCGN_02845 in Escherichia coli ECOR38

24 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli ECOR38 1.0 HEPCGN_17305 yqjF Inner membrane protein YqjF 1.0 HEPCGN_02845 yegQ tRNA 5-hydroxyuridine modification protein YegQ 0.57 12
Escherichia coli ECOR27 1.00 NOLOHH_10250 yqjF Inner membrane protein YqjF 1.00 NOLOHH_15500 yegQ tRNA 5-hydroxyuridine modification protein YegQ low > 75
Escherichia coli ECRC102 1.00 NIAGMN_16235 yqjF Inner membrane protein YqjF 1.00 NIAGMN_22110 yegQ tRNA 5-hydroxyuridine modification protein YegQ — —
Escherichia coli ECRC101 1.00 MCAODC_08985 yqjF Inner membrane protein YqjF 1.00 MCAODC_20775 yegQ tRNA 5-hydroxyuridine modification protein YegQ low > 87
Escherichia coli ECRC100 1.00 OKFHMN_18470 yqjF Inner membrane protein YqjF 1.00 OKFHMN_24165 yegQ tRNA 5-hydroxyuridine modification protein YegQ low > 80
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_00597 Inner membrane protein YqjF 1.00 OHPLBJKB_01623 putative protease YdcP low > 73
Escherichia coli ECRC98 1.00 JDDGAC_22105 yqjF Inner membrane protein YqjF 1.00 JDDGAC_28275 yegQ tRNA 5-hydroxyuridine modification protein YegQ low > 86
Escherichia coli ECRC62 0.99 BNILDI_01265 doxX DoxX family protein 1.00 BNILDI_14415 yegQ tRNA 5-hydroxyuridine modification protein YegQ low > 75
Escherichia coli ECRC99 0.99 KEDOAH_09675 doxX DoxX 1.00 KEDOAH_03985 yegQ tRNA 5-hydroxyuridine modification protein YegQ — —
Escherichia fergusonii Becca 0.98 EFB2_00711 Inner membrane protein YqjF 1.00 EFB2_01770 23S rRNA 5-hydroxycytidine synthase low > 86
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.82 GFF3198 Inner membrane protein YqjF 0.94 GFF3846 Putative protease low > 78
Escherichia coli BW25113 0.81 b3101 yqjF orf, hypothetical protein (VIMSS) 1.00 b2081 yegQ predicted peptidase (NCBI) low > 76
Escherichia coli BL21 0.81 ECD_02970 putative quinol oxidase subunit 1.00 ECD_01986 putative peptidase low > 61
Escherichia coli Nissle 1917 0.79 ECOLIN_RS17875 DoxX family protein 1.00 ECOLIN_RS12250 tRNA 5-hydroxyuridine modification protein YegQ low > 55
Klebsiella michiganensis M5al 0.79 BWI76_RS24775 hypothetical protein 0.94 BWI76_RS19280 U32 family peptidase low > 92
Enterobacter sp. TBS_079 0.79 MPMX20_04010 Inner membrane protein YqjF 0.91 MPMX20_03067 23S rRNA 5-hydroxycytidine synthase low > 85
Enterobacter asburiae PDN3 0.78 EX28DRAFT_3169 Predicted membrane protein 0.92 EX28DRAFT_0478 Collagenase and related proteases low > 76
Pantoea sp. MT58 0.74 IAI47_02865 DoxX family protein 0.83 IAI47_06845 tRNA 5-hydroxyuridine modification protein YegQ low > 76
Serratia liquefaciens MT49 0.67 IAI46_22270 DoxX family protein 0.83 IAI46_19015 tRNA 5-hydroxyuridine modification protein YegQ low > 86
Erwinia tracheiphila SCR3 0.66 LU632_RS02275 DoxX family protein 0.80 LU632_RS08665 yegQ tRNA 5-hydroxyuridine modification protein YegQ low > 74
Pectobacterium carotovorum WPP14 0.60 HER17_RS18760 DoxX family protein 0.85 HER17_RS06280 tRNA 5-hydroxyuridine modification protein YegQ low > 75
Rahnella sp. WP5 0.60 EX31_RS12630 DoxX family protein 0.85 EX31_RS20325 tRNA 5-hydroxyuridine modification protein YegQ low > 89
Dickeya dadantii 3937 0.54 DDA3937_RS02785 DoxX family protein 0.85 DDA3937_RS15295 tRNA 5-hydroxyuridine modification protein YegQ low > 74
Dickeya dianthicola 67-19 0.54 HGI48_RS02760 DoxX family protein 0.83 HGI48_RS15375 tRNA 5-hydroxyuridine modification protein YegQ low > 71
Dickeya dianthicola ME23 0.54 DZA65_RS02915 DoxX family protein 0.83 DZA65_RS16195 tRNA 5-hydroxyuridine modification protein YegQ low > 75

Not shown: 0 genomes with orthologs for HEPCGN_17305 only; 24 genomes with orthologs for HEPCGN_02845 only