Conservation of cofitness between GFF3239 and GFF494 in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

20 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 1.0 GFF3239 23S rRNA (guanine-N-2-) -methyltransferase rlmL EC 2.1.1.-) 1.0 GFF494 Protein yhjK 0.59 10
Escherichia coli ECOR38 0.92 HEPCGN_23240 rlmKL bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL 0.83 HEPCGN_15095 hmsP biofilm formation regulator HmsP low > 87
Escherichia coli BW25113 0.92 b0948 ycbY predicted methyltransferase (NCBI) 0.84 b3529 yhjK predicted diguanylate cyclase (RefSeq) low > 76
Escherichia coli HS(pFamp)R (ATCC 700891) 0.92 OHPLBJKB_02718 Ribosomal RNA large subunit methyltransferase K/L 0.83 OHPLBJKB_00173 putative cyclic di-GMP phosphodiesterase PdeK low > 73
Escherichia coli BL21 0.92 ECD_00952 23S rRNA m(2)G2445 and m(7)G2069 methyltransferases, SAM-dependent 0.83 ECD_03377 cyclic-di-GMP phosphodiesterase low > 61
Escherichia coli ECRC99 0.92 KEDOAH_22455 rlmKL bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL 0.83 KEDOAH_11960 hmsP biofilm formation regulator HmsP — —
Escherichia coli ECRC101 0.92 MCAODC_24670 rlmKL bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL 0.83 MCAODC_06705 hmsP biofilm formation regulator HmsP low > 87
Escherichia coli ECRC102 0.92 NIAGMN_03000 rlmKL bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL 0.83 NIAGMN_13955 hmsP biofilm formation regulator HmsP — —
Escherichia coli ECRC100 0.92 OKFHMN_05280 rlmKL bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL 0.83 OKFHMN_16190 hmsP biofilm formation regulator HmsP low > 80
Escherichia coli ECRC62 0.92 BNILDI_20000 rlmKL bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL 0.83 BNILDI_03400 hmsP biofilm formation regulator HmsP low > 75
Escherichia coli ECOR27 0.92 NOLOHH_21835 rlmKL bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL 0.83 NOLOHH_08155 hmsP biofilm formation regulator HmsP low > 75
Escherichia fergusonii Becca 0.92 EFB2_03123 Ribosomal RNA large subunit methyltransferase K/L 0.83 EFB2_00279 putative cyclic di-GMP phosphodiesterase PdeK low > 86
Escherichia coli Nissle 1917 0.92 ECOLIN_RS04980 bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL 0.84 ECOLIN_RS20185 biofilm formation regulator HmsP low > 55
Escherichia coli ECRC98 0.92 JDDGAC_08890 rlmKL bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL 0.83 JDDGAC_19820 hmsP biofilm formation regulator HmsP low > 86
Enterobacter sp. TBS_079 0.88 MPMX20_01599 Ribosomal RNA large subunit methyltransferase K/L 0.82 MPMX20_04414 putative cyclic di-GMP phosphodiesterase PdeK low > 85
Enterobacter asburiae PDN3 0.88 EX28DRAFT_1995 Predicted N6-adenine-specific DNA methylase 0.83 EX28DRAFT_4048 FOG: EAL domain low > 76
Klebsiella michiganensis M5al 0.87 BWI76_RS09925 23S rRNA (guanine(2445)-N(2))/(guanine(2069)-N(7))- methyltransferase 0.74 BWI76_RS26765 phosphodiesterase low > 92
Serratia liquefaciens MT49 0.78 IAI46_08820 bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL 0.51 IAI46_00545 biofilm formation regulator HmsP low > 86
Rahnella sp. WP5 0.77 EX31_RS18080 bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL 0.41 EX31_RS05450 biofilm formation regulator HmsP low > 89
Pantoea sp. MT58 0.76 IAI47_12690 bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL 0.50 IAI47_18590 biofilm formation regulator HmsP low > 76
Erwinia tracheiphila SCR3 0.76 LU632_RS09965 rlmKL bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL 0.49 LU632_RS00325 hmsP biofilm formation regulator HmsP low > 74

Not shown: 33 genomes with orthologs for GFF3239 only; 0 genomes with orthologs for GFF494 only