Conservation of cofitness between GFF4973 and GFF4454 in Hydrogenophaga sp. GW460-11-11-14-LB1

26 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Hydrogenophaga sp. GW460-11-11-14-LB1 1.0 GFF4973 Aerotaxis sensor receptor protein 1.0 GFF4454 Transcriptional regulator, LacI family 0.40 18
Erwinia amylovora T8 0.59 OLJFJH_03325 Methyl-accepting chemotaxis protein (MCP) signalling domain-containing protein 0.25 OLJFJH_05415 ribose operon transcriptional repressor RbsR low > 58
Pantoea sp. MT58 0.59 IAI47_17690 PAS domain-containing protein 0.26 IAI47_00375 ribose operon transcriptional repressor RbsR low > 76
Pantoea agglomerans CFBP13505 P0401 0.57 PagCFBP13505_RS21010 PAS domain-containing methyl-accepting chemotaxis protein 0.26 PagCFBP13505_RS18960 ribose operon transcriptional repressor RbsR low > 74
Rahnella sp. WP5 0.54 EX31_RS01840 PAS domain-containing protein 0.24 EX31_RS06195 ribose operon transcriptional repressor RbsR low > 89
Enterobacter sp. TBS_079 0.50 MPMX20_03981 Aerotaxis receptor 0.25 MPMX20_04614 Ribose operon repressor low > 85
Enterobacter asburiae PDN3 0.50 EX28DRAFT_3139 methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor 0.25 EX28DRAFT_4029 transcriptional regulator, LacI family low > 76
Dickeya dianthicola ME23 0.50 DZA65_RS12700 PAS domain-containing protein 0.22 DZA65_RS16225 LacI family transcriptional regulator low > 75
Dickeya dianthicola 67-19 0.50 HGI48_RS12260 PAS domain-containing protein 0.24 HGI48_RS21310 ribose operon transcriptional repressor RbsR low > 71
Escherichia coli ECRC100 0.49 OKFHMN_18630 aer aerotaxis sensor receptor Aer 0.25 OKFHMN_14725 rbsR ribose operon transcriptional repressor RbsR 0.55 22
Dickeya dadantii 3937 0.49 DDA3937_RS12165 PAS domain-containing protein 0.25 DDA3937_RS00055 ribose operon transcriptional repressor RbsR low > 74
Escherichia coli ECRC102 0.49 NIAGMN_16395 aer aerotaxis sensor receptor Aer 0.25 NIAGMN_12480 rbsR ribose operon transcriptional repressor RbsR low > 80
Escherichia coli ECRC101 0.49 MCAODC_09145 aer aerotaxis sensor receptor Aer 0.25 MCAODC_05230 rbsR ribose operon transcriptional repressor RbsR low > 88
Escherichia coli ECRC99 0.49 KEDOAH_09515 aer aerotaxis sensor receptor Aer 0.25 KEDOAH_13425 rbsR ribose operon transcriptional repressor RbsR — —
Escherichia coli ECRC98 0.49 JDDGAC_22265 aer aerotaxis sensor receptor Aer 0.25 JDDGAC_18345 rbsR ribose operon transcriptional repressor RbsR low > 87
Escherichia coli HS(pFamp)R (ATCC 700891) 0.49 OHPLBJKB_00630 Aerotaxis receptor 0.24 OHPLBJKB_04117 HTH-type transcriptional repressor CytR 0.31 39
Escherichia coli BW25113 0.49 b3072 aer fused signal transducer for aerotaxis sensory component/methyl accepting chemotaxis component (NCBI) 0.25 b3753 rbsR DNA-binding transcriptional repressor of ribose metabolism (NCBI) low > 76
Escherichia coli BL21 0.49 ECD_02941 fused signal transducer for aerotaxis sensory component/methyl accepting chemotaxis component 0.25 ECD_03639 transcriptional repressor of ribose metabolism low > 61
Escherichia coli Nissle 1917 0.49 ECOLIN_RS17730 aerotaxis sensor receptor Aer 0.25 ECOLIN_RS21575 ribose operon transcriptional repressor RbsR low > 55
Escherichia coli ECOR27 0.49 NOLOHH_10420 aer aerotaxis sensor receptor Aer 0.25 NOLOHH_06860 rbsR ribose operon transcriptional repressor RbsR low > 76
Escherichia fergusonii Becca 0.49 EFB2_00739 Aerotaxis receptor 0.25 EFB2_04880 Ribose operon repressor low > 86
Escherichia coli ECRC62 0.49 BNILDI_01095 aer aerotaxis sensor receptor Aer 0.25 BNILDI_04665 rbsR ribose operon transcriptional repressor RbsR low > 75
Escherichia coli ECOR38 0.49 HEPCGN_17480 aer aerotaxis sensor receptor Aer 0.25 HEPCGN_13435 rbsR ribose operon transcriptional repressor RbsR low > 88
Variovorax sp. SCN45 0.49 GFF5729 Methyl-accepting chemotaxis sensor/transducer protein 0.24 GFF2137 Ribose operon repressor low > 127
Herbaspirillum seropedicae SmR1 0.48 HSERO_RS02230 methyl-accepting chemotaxis protein 0.25 HSERO_RS11495 LacI family transcription regulator low > 78
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.48 GFF3182 Aerotaxis sensor receptor protein 0.25 GFF1704 Ribose operon repressor low > 78
Pectobacterium carotovorum WPP14 0.48 HER17_RS04065 PAS domain-containing methyl-accepting chemotaxis protein 0.25 HER17_RS21525 ribose operon transcriptional repressor RbsR low > 75

Not shown: 10 genomes with orthologs for GFF4973 only; 30 genomes with orthologs for GFF4454 only