Conservation of cofitness between GFF2847 and GFF4192 in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

26 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 1.0 GFF2847 Free methionine-(R)-sulfoxide reductase, contains GAF domain 1.0 GFF4192 DNA-binding protein HU-alpha 0.72 1
Escherichia coli HS(pFamp)R (ATCC 700891) 0.88 OHPLBJKB_01899 Free methionine-R-sulfoxide reductase 0.99 OHPLBJKB_04050 DNA-binding protein HU-alpha 0.72 11
Escherichia coli ECRC100 0.88 OKFHMN_26455 msrC L-methionine (R)-S-oxide reductase 0.99 OKFHMN_13345 hupA DNA-binding protein HU-alpha low > 80
Escherichia coli BL21 0.88 ECD_01803 free methionine-(R)-sulfoxide reductase 0.99 ECD_03877 HU, DNA-binding transcriptional regulator, alpha subunit low > 61
Escherichia coli ECRC98 0.88 JDDGAC_01030 msrC L-methionine (R)-S-oxide reductase 0.99 JDDGAC_16970 hupA DNA-binding protein HU-alpha low > 86
Escherichia coli ECOR27 0.88 NOLOHH_16965 msrC L-methionine (R)-S-oxide reductase 0.99 NOLOHH_05490 hupA DNA-binding protein HU-alpha low > 75
Escherichia coli ECRC102 0.88 NIAGMN_01605 msrC L-methionine (R)-S-oxide reductase 0.99 NIAGMN_11095 hupA DNA-binding protein HU-alpha — —
Escherichia coli ECRC101 0.88 MCAODC_18950 msrC L-methionine (R)-S-oxide reductase 0.99 MCAODC_03845 hupA DNA-binding protein HU-alpha low > 87
Escherichia coli ECRC99 0.88 KEDOAH_01650 msrC L-methionine (R)-S-oxide reductase 0.99 KEDOAH_14815 hupA DNA-binding protein HU-alpha — —
Escherichia coli ECRC62 0.88 BNILDI_15760 msrC L-methionine (R)-S-oxide reductase 0.99 BNILDI_06035 hupA DNA-binding protein HU-alpha low > 75
Escherichia fergusonii Becca 0.87 EFB2_02169 Free methionine-R-sulfoxide reductase 0.99 EFB2_04611 DNA-binding protein HU-alpha low > 86
Escherichia coli BW25113 0.87 b1832 yebR free methionine-(R)-sulfoxide reductase (RefSeq) 0.99 b4000 hupA HU, DNA-binding transcriptional regulator, alpha subunit (NCBI) low > 76
Escherichia coli ECOR38 0.86 HEPCGN_04855 msrC L-methionine (R)-S-oxide reductase 0.98 HEPCGN_11980 hupA DNA-binding protein HU-alpha low > 87
Enterobacter asburiae PDN3 0.85 EX28DRAFT_0724 GAF domain-containing protein 0.98 EX28DRAFT_4542 Bacterial nucleoid DNA-binding protein low > 76
Enterobacter sp. TBS_079 0.85 MPMX20_02739 Free methionine-R-sulfoxide reductase 0.98 MPMX20_00223 DNA-binding protein HU-alpha 0.22 36
Klebsiella michiganensis M5al 0.81 BWI76_RS17985 hypothetical protein 0.97 BWI76_RS01585 transcriptional regulator low > 92
Pantoea sp. MT58 0.67 IAI47_08695 GAF domain-containing protein 0.97 IAI47_18055 DNA-binding protein HU-alpha 0.46 2
Erwinia tracheiphila SCR3 0.66 LU632_RS13260 GAF domain-containing protein 0.99 LU632_RS01000 hupA DNA-binding protein HU-alpha low > 74
Rahnella sp. WP5 0.66 EX31_RS24870 GAF domain-containing protein 0.96 EX31_RS16845 DNA-binding protein HU-alpha low > 89
Serratia liquefaciens MT49 0.64 IAI46_10790 GAF domain-containing protein 0.96 IAI46_01350 DNA-binding protein HU-alpha low > 86
Pectobacterium carotovorum WPP14 0.64 HER17_RS11700 GAF domain-containing protein 0.97 HER17_RS20350 DNA-binding protein HU-alpha low > 75
Dickeya dianthicola 67-19 0.61 HGI48_RS12065 GAF domain-containing protein 0.96 HGI48_RS01200 DNA-binding protein HU-alpha — —
Dickeya dadantii 3937 0.61 DDA3937_RS11975 GAF domain-containing protein 0.97 DDA3937_RS01205 DNA-binding protein HU-alpha — —
Dickeya dianthicola ME23 0.61 DZA65_RS12515 GAF domain-containing protein 0.96 DZA65_RS01245 DNA-binding protein HU-alpha — —
Rhizobium sp. OAE497 0.49 ABIE40_RS12595 GAF domain-containing protein 0.46 ABIE40_RS07105 DNA-binding protein HupB low > 107
Pseudomonas sp. RS175 0.47 PFR28_00990 Free methionine-R-sulfoxide reductase 0.51 PFR28_04473 DNA-binding protein HU-beta low > 88
Lysobacter sp. OAE881 0.46 ABIE51_RS17995 GAF domain-containing protein 0.60 ABIE51_RS05120 HU family DNA-binding protein — —

Not shown: 43 genomes with orthologs for GFF2847 only; 11 genomes with orthologs for GFF4192 only