Conservation of cofitness between GFF2267 and GFF414 in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

19 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 1.0 GFF2267 L-rhamnose operon transcriptional activator RhaR 1.0 GFF414 FIG00638433: Hypothetical protein YibL 0.52 1
Escherichia coli ECRC101 0.81 MCAODC_04385 rhaR HTH-type transcriptional activator RhaR 0.92 MCAODC_06305 yibL YibL family ribosome-associated protein low > 87
Escherichia coli ECRC99 0.81 KEDOAH_14270 rhaR HTH-type transcriptional activator RhaR 0.92 KEDOAH_12355 yibL YibL family ribosome-associated protein — —
Escherichia coli ECRC98 0.81 JDDGAC_17510 rhaR HTH-type transcriptional activator RhaR 0.92 JDDGAC_19420 yibL YibL family ribosome-associated protein low > 86
Escherichia coli ECRC100 0.81 OKFHMN_13885 rhaR HTH-type transcriptional activator RhaR 0.92 OKFHMN_15795 yibL YibL family ribosome-associated protein low > 80
Escherichia coli ECRC102 0.81 NIAGMN_11640 rhaR HTH-type transcriptional activator RhaR 0.92 NIAGMN_13555 yibL YibL family ribosome-associated protein — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.81 OHPLBJKB_04144 HTH-type transcriptional activator RhaR 0.91 OHPLBJKB_00099 putative protein YibL low > 73
Escherichia coli ECOR27 0.81 NOLOHH_06015 rhaR HTH-type transcriptional activator RhaR 0.92 NOLOHH_07675 yibL YibL family ribosome-associated protein low > 75
Escherichia coli BW25113 0.81 b3906 rhaR DNA-binding transcriptional activator, L-rhamnose-binding (RefSeq) 0.92 b3602 yibL hypothetical protein (NCBI) low > 76
Escherichia coli ECOR38 0.80 HEPCGN_12525 rhaR HTH-type transcriptional activator RhaR 0.92 HEPCGN_14635 yibL YibL family ribosome-associated protein low > 87
Escherichia coli ECRC62 0.80 BNILDI_05510 rhaR HTH-type transcriptional activator RhaR 0.92 BNILDI_03840 yibL YibL family ribosome-associated protein low > 75
Escherichia coli BL21 0.80 ECD_03792 transcriptional activator of rhaSR 0.91 ECD_03458 ribosome-associated DUF2810 family protein low > 61
Escherichia fergusonii Becca 0.80 EFB2_04711 HTH-type transcriptional activator RhaR 0.92 EFB2_00210 putative protein YibL low > 86
Escherichia coli Nissle 1917 0.80 ECOLIN_RS22505 HTH-type transcriptional activator RhaR 0.92 ECOLIN_RS20555 YibL family ribosome-associated protein — —
Enterobacter sp. TBS_079 0.74 MPMX20_04561 HTH-type transcriptional activator RhaR 0.77 MPMX20_00132 putative protein YibL low > 85
Klebsiella michiganensis M5al 0.73 BWI76_RS00695 AraC family transcriptional regulator 0.90 BWI76_RS27180 hypothetical protein low > 92
Pantoea sp. MT58 0.50 IAI47_09690 HTH-type transcriptional activator RhaR 0.57 IAI47_18715 YibL family ribosome-associated protein low > 76
Erwinia tracheiphila SCR3 0.44 LU632_RS11695 rhaR HTH-type transcriptional activator RhaR 0.59 LU632_RS00135 YibL family ribosome-associated protein low > 74
Pectobacterium carotovorum WPP14 0.43 HER17_RS19240 helix-turn-helix domain-containing protein 0.62 HER17_RS21120 YibL family ribosome-associated protein low > 75
Rahnella sp. WP5 0.41 EX31_RS04165 HTH-type transcriptional activator RhaR 0.56 EX31_RS05800 YibL family ribosome-associated protein low > 89

Not shown: 6 genomes with orthologs for GFF2267 only; 6 genomes with orthologs for GFF414 only