| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 1.0 | GFF3392 | | NADH dehydrogenase (EC 1.6.99.3) | 1.0 | GFF4103 | | probable exported protein STY0357 | 0.51 | 16 |
| Escherichia coli ECOR38 | 0.94 | HEPCGN_23990 | ndh | NADH-quinone dehydrogenase | 0.92 | HEPCGN_07870 | dpaA | peptidoglycan meso-diaminopimelic acid protein amidase | low | > 87 |
| Escherichia coli ECOR27 | 0.94 | NOLOHH_21020 | ndh | NADH-quinone dehydrogenase | 0.92 | NOLOHH_02135 | dpaA | peptidoglycan meso-diaminopimelic acid protein amidase | low | > 75 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.94 | OHPLBJKB_02557 | | NADH dehydrogenase | 0.92 | OHPLBJKB_03415 | | hypothetical protein | low | > 73 |
| Escherichia coli BW25113 | 0.94 | b1109 | ndh | respiratory NADH dehydrogenase 2/cupric reductase (NCBI) | 0.92 | b0224 | yafK | hypothetical protein (NCBI) | low | > 76 |
| Escherichia coli Nissle 1917 | 0.94 | ECOLIN_RS06400 | | NADH-quinone dehydrogenase | 0.91 | ECOLIN_RS01760 | | peptidoglycan meso-diaminopimelic acid protein amidase | low | > 55 |
| Escherichia coli ECRC62 | 0.94 | BNILDI_19185 | ndh | NADH-quinone dehydrogenase | 0.92 | BNILDI_00330 | dpaA | peptidoglycan meso-diaminopimelic acid protein amidase | low | > 75 |
| Escherichia fergusonii Becca | 0.94 | EFB2_02866 | | NADH dehydrogenase | 0.92 | EFB2_03793 | | hypothetical protein | low | > 86 |
| Escherichia coli BL21 | 0.94 | ECD_01105 | | respiratory NADH dehydrogenase 2/cupric reductase | 0.92 | ECD_00219 | | L,D-transpeptidase-related protein | low | > 61 |
| Escherichia coli ECRC98 | 0.93 | JDDGAC_07155 | ndh | NADH-quinone dehydrogenase | 0.92 | JDDGAC_13390 | dpaA | peptidoglycan meso-diaminopimelic acid protein amidase | low | > 86 |
| Escherichia coli ECRC99 | 0.93 | KEDOAH_24260 | ndh | NADH-quinone dehydrogenase | 0.92 | KEDOAH_18390 | dpaA | peptidoglycan meso-diaminopimelic acid protein amidase | — | — |
| Escherichia coli ECRC101 | 0.93 | MCAODC_22855 | ndh | NADH-quinone dehydrogenase | 0.92 | MCAODC_00285 | dpaA | peptidoglycan meso-diaminopimelic acid protein amidase | low | > 87 |
| Escherichia coli ECRC102 | 0.93 | NIAGMN_24335 | ndh | NADH-quinone dehydrogenase | 0.92 | NIAGMN_07625 | dpaA | peptidoglycan meso-diaminopimelic acid protein amidase | — | — |
| Escherichia coli ECRC100 | 0.93 | OKFHMN_03495 | ndh | NADH-quinone dehydrogenase | 0.92 | OKFHMN_09765 | dpaA | peptidoglycan meso-diaminopimelic acid protein amidase | low | > 80 |
| Enterobacter sp. TBS_079 | 0.90 | MPMX20_01790 | | NADH dehydrogenase | 0.92 | MPMX20_00913 | | hypothetical protein | low | > 85 |
| Enterobacter asburiae PDN3 | 0.90 | EX28DRAFT_1821 | | NADH dehydrogenase, FAD-containing subunit | 0.92 | EX28DRAFT_2665 | | Uncharacterized protein conserved in bacteria | low | > 76 |
| Klebsiella michiganensis M5al | 0.89 | BWI76_RS11175 | | NADH dehydrogenase | 0.91 | BWI76_RS05485 | | transpeptidase | — | — |
| Pantoea sp. MT58 | 0.82 | IAI47_11985 | | NAD(P)/FAD-dependent oxidoreductase | 0.64 | IAI47_15180 | | murein L,D-transpeptidase | low | > 76 |
| Rahnella sp. WP5 | 0.80 | EX31_RS24510 | | NAD(P)/FAD-dependent oxidoreductase | 0.59 | EX31_RS21010 | | murein L,D-transpeptidase | low | > 89 |
| Erwinia tracheiphila SCR3 | 0.80 | LU632_RS14740 | | NAD(P)/FAD-dependent oxidoreductase | 0.64 | LU632_RS01145 | dpaA | peptidoglycan meso-diaminopimelic acid protein amidase | low | > 74 |
| Serratia liquefaciens MT49 | 0.80 | IAI46_09910 | | NAD(P)/FAD-dependent oxidoreductase | 0.59 | IAI46_04350 | | murein L,D-transpeptidase | low | > 86 |
| Dickeya dadantii 3937 | 0.78 | DDA3937_RS13040 | | NAD(P)/FAD-dependent oxidoreductase | 0.59 | DDA3937_RS16580 | | murein L,D-transpeptidase | low | > 74 |
| Dickeya dianthicola 67-19 | 0.78 | HGI48_RS13105 | | NAD(P)/FAD-dependent oxidoreductase | 0.58 | HGI48_RS16650 | | murein L,D-transpeptidase | low | > 71 |
| Pectobacterium carotovorum WPP14 | 0.78 | HER17_RS08735 | | NAD(P)/FAD-dependent oxidoreductase | 0.59 | HER17_RS04655 | | peptidoglycan meso-diaminopimelic acid protein amidase | low | > 75 |
| Dickeya dianthicola ME23 | 0.77 | DZA65_RS13575 | | NAD(P)/FAD-dependent oxidoreductase | 0.58 | DZA65_RS17740 | | murein L,D-transpeptidase | low | > 75 |