Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 1.0 | GFF1707 | | Ribose ABC transport system, permease protein RbsC (TC 3.A.1.2.1) | 1.0 | GFF3970 | | L,D-transpeptidase YbiS | 0.48 | 12 |
Enterobacter sp. TBS_079 | 0.93 | MPMX20_04617 | | Ribose import permease protein RbsC | 0.75 | MPMX20_02985 | | putative L,D-transpeptidase ErfK/SrfK | low | > 85 |
Enterobacter asburiae PDN3 | 0.93 | EX28DRAFT_4026 | | Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components | 0.72 | EX28DRAFT_0563 | | Uncharacterized protein conserved in bacteria | low | > 76 |
Escherichia coli ECRC99 | 0.92 | KEDOAH_13410 | rbsC | ribose ABC transporter permease | 0.82 | KEDOAH_02970 | ldtA | L,D-transpeptidase | — | — |
Escherichia coli ECOR27 | 0.92 | NOLOHH_06875 | rbsC | ribose ABC transporter permease | 0.82 | NOLOHH_16050 | ldtA | L,D-transpeptidase | low | > 75 |
Escherichia coli ECRC98 | 0.92 | JDDGAC_18360 | rbsC | ribose ABC transporter permease | 0.82 | JDDGAC_29270 | ldtA | L,D-transpeptidase | low | > 86 |
Escherichia coli HS(pFamp)R (ATCC 700891) | 0.92 | OHPLBJKB_04303 | | Ribose import permease protein RbsC | 0.81 | OHPLBJKB_01718 | | putative L,D-transpeptidase ErfK/SrfK | low | > 73 |
Escherichia coli BW25113 | 0.92 | b3750 | rbsC | ribose ABC transporter permease protein (NCBI) | 0.82 | b1990 | erfK | conserved protein with NAD(P)-binding Rossmann-fold domain (NCBI) | low | > 76 |
Escherichia coli ECRC102 | 0.92 | NIAGMN_12495 | rbsC | ribose ABC transporter permease | 0.82 | NIAGMN_22645 | ldtA | L,D-transpeptidase | — | — |
Escherichia coli ECRC101 | 0.92 | MCAODC_05245 | rbsC | ribose ABC transporter permease | 0.82 | MCAODC_20250 | ldtA | L,D-transpeptidase | low | > 87 |
Escherichia coli BL21 | 0.92 | ECD_03636 | | D-ribose ABC transporter permease | 0.82 | ECD_01899 | | L,D-transpeptidase linking Lpp to murein | low | > 61 |
Escherichia coli ECRC62 | 0.92 | BNILDI_04650 | rbsC | ribose ABC transporter permease | 0.82 | BNILDI_14880 | ldtA | L,D-transpeptidase | low | > 75 |
Escherichia coli ECRC100 | 0.92 | OKFHMN_14740 | rbsC | ribose ABC transporter permease | 0.82 | OKFHMN_25140 | ldtA | L,D-transpeptidase | low | > 80 |
Escherichia coli Nissle 1917 | 0.92 | ECOLIN_RS21560 | | ribose ABC transporter permease | 0.80 | ECOLIN_RS11615 | | L,D-transpeptidase | low | > 55 |
Escherichia fergusonii Becca | 0.92 | EFB2_04883 | | Ribose import permease protein RbsC | 0.80 | EFB2_01899 | | putative L,D-transpeptidase ErfK/SrfK | low | > 86 |
Klebsiella michiganensis M5al | 0.92 | BWI76_RS00280 | | ribose ABC transporter permease | 0.81 | BWI76_RS18620 | | L,D-transpeptidase | low | > 92 |
Escherichia coli ECOR38 | 0.92 | HEPCGN_13450 | rbsC | ribose ABC transporter permease | 0.80 | HEPCGN_03475 | ldtA | L,D-transpeptidase | low | > 87 |
Pseudomonas syringae pv. syringae B728a ΔmexB | 0.38 | Psyr_2570 | | monosaccharide ABC transporter membrane protein, CUT2 family | 0.33 | Psyr_2070 | | ErfK/YbiS/YcfS/YnhG | low | > 86 |
Pseudomonas syringae pv. syringae B728a | 0.38 | Psyr_2570 | | monosaccharide ABC transporter membrane protein, CUT2 family | 0.33 | Psyr_2070 | | ErfK/YbiS/YcfS/YnhG | low | > 86 |
Pseudomonas fluorescens FW300-N2E3 | 0.31 | AO353_21390 | | m-Inositol ABC transporter, permease component (iatP) (from data) | 0.33 | AO353_19015 | | hypothetical protein | low | > 101 |
Not shown: 47 genomes with orthologs for GFF1707 only; 1 genomes with orthologs for GFF3970 only