Conservation of cofitness between GFF1707 and GFF3970 in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

19 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 1.0 GFF1707 Ribose ABC transport system, permease protein RbsC (TC 3.A.1.2.1) 1.0 GFF3970 L,D-transpeptidase YbiS 0.48 12
Enterobacter sp. TBS_079 0.93 MPMX20_04617 Ribose import permease protein RbsC 0.75 MPMX20_02985 putative L,D-transpeptidase ErfK/SrfK low > 85
Enterobacter asburiae PDN3 0.93 EX28DRAFT_4026 Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components 0.72 EX28DRAFT_0563 Uncharacterized protein conserved in bacteria low > 76
Escherichia coli ECRC99 0.92 KEDOAH_13410 rbsC ribose ABC transporter permease 0.82 KEDOAH_02970 ldtA L,D-transpeptidase
Escherichia coli ECOR27 0.92 NOLOHH_06875 rbsC ribose ABC transporter permease 0.82 NOLOHH_16050 ldtA L,D-transpeptidase low > 75
Escherichia coli ECRC98 0.92 JDDGAC_18360 rbsC ribose ABC transporter permease 0.82 JDDGAC_29270 ldtA L,D-transpeptidase low > 86
Escherichia coli HS(pFamp)R (ATCC 700891) 0.92 OHPLBJKB_04303 Ribose import permease protein RbsC 0.81 OHPLBJKB_01718 putative L,D-transpeptidase ErfK/SrfK low > 73
Escherichia coli BW25113 0.92 b3750 rbsC ribose ABC transporter permease protein (NCBI) 0.82 b1990 erfK conserved protein with NAD(P)-binding Rossmann-fold domain (NCBI) low > 76
Escherichia coli ECRC102 0.92 NIAGMN_12495 rbsC ribose ABC transporter permease 0.82 NIAGMN_22645 ldtA L,D-transpeptidase
Escherichia coli ECRC101 0.92 MCAODC_05245 rbsC ribose ABC transporter permease 0.82 MCAODC_20250 ldtA L,D-transpeptidase low > 87
Escherichia coli BL21 0.92 ECD_03636 D-ribose ABC transporter permease 0.82 ECD_01899 L,D-transpeptidase linking Lpp to murein low > 61
Escherichia coli ECRC62 0.92 BNILDI_04650 rbsC ribose ABC transporter permease 0.82 BNILDI_14880 ldtA L,D-transpeptidase low > 75
Escherichia coli ECRC100 0.92 OKFHMN_14740 rbsC ribose ABC transporter permease 0.82 OKFHMN_25140 ldtA L,D-transpeptidase low > 80
Escherichia coli Nissle 1917 0.92 ECOLIN_RS21560 ribose ABC transporter permease 0.80 ECOLIN_RS11615 L,D-transpeptidase low > 55
Escherichia fergusonii Becca 0.92 EFB2_04883 Ribose import permease protein RbsC 0.80 EFB2_01899 putative L,D-transpeptidase ErfK/SrfK low > 86
Klebsiella michiganensis M5al 0.92 BWI76_RS00280 ribose ABC transporter permease 0.81 BWI76_RS18620 L,D-transpeptidase low > 92
Escherichia coli ECOR38 0.92 HEPCGN_13450 rbsC ribose ABC transporter permease 0.80 HEPCGN_03475 ldtA L,D-transpeptidase low > 87
Pseudomonas syringae pv. syringae B728a ΔmexB 0.38 Psyr_2570 monosaccharide ABC transporter membrane protein, CUT2 family 0.33 Psyr_2070 ErfK/YbiS/YcfS/YnhG low > 86
Pseudomonas syringae pv. syringae B728a 0.38 Psyr_2570 monosaccharide ABC transporter membrane protein, CUT2 family 0.33 Psyr_2070 ErfK/YbiS/YcfS/YnhG low > 86
Pseudomonas fluorescens FW300-N2E3 0.31 AO353_21390 m-Inositol ABC transporter, permease component (iatP) (from data) 0.33 AO353_19015 hypothetical protein low > 101

Not shown: 47 genomes with orthologs for GFF1707 only; 1 genomes with orthologs for GFF3970 only