Conservation of cofitness between GFF3093 and GFF3873 in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

21 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 1.0 GFF3093 Mannonate dehydratase (EC 4.2.1.8) 1.0 GFF3873 Colanic acid biosynthesis glycosyl transferase WcaE 0.44 3
Escherichia coli BL21 0.93 ECD_04191 mannonate hydrolase 0.74 ECD_01961 putative glycosyl transferase — —
Escherichia fergusonii Becca 0.93 EFB2_04122 Mannonate dehydratase 0.73 EFB2_01799 hypothetical protein low > 86
Escherichia coli Nissle 1917 0.93 ECOLIN_RS24835 mannonate dehydratase 0.72 ECOLIN_RS12105 colanic acid biosynthesis glycosyltransferase WcaE — —
Escherichia coli ECRC62 0.93 BNILDI_07705 uxuA mannonate dehydratase 0.74 BNILDI_14575 wcaE colanic acid biosynthesis glycosyltransferase WcaE low > 75
Escherichia coli BW25113 0.93 b4322 uxuA mannonate dehydratase (NCBI) 0.74 b2055 wcaE predicted glycosyl transferase (NCBI) low > 76
Escherichia coli ECRC101 0.93 MCAODC_02080 uxuA mannonate dehydratase 0.73 MCAODC_20605 wcaE colanic acid biosynthesis glycosyltransferase WcaE low > 87
Escherichia coli ECRC98 0.93 JDDGAC_15160 uxuA mannonate dehydratase 0.74 JDDGAC_28445 wcaE colanic acid biosynthesis glycosyltransferase WcaE low > 86
Escherichia coli ECRC102 0.93 NIAGMN_09415 uxuA mannonate dehydratase 0.74 NIAGMN_22280 wcaE colanic acid biosynthesis glycosyltransferase WcaE — —
Escherichia coli ECOR27 0.93 NOLOHH_03890 uxuA mannonate dehydratase 0.73 NOLOHH_15665 wcaE colanic acid biosynthesis glycosyltransferase WcaE — —
Escherichia coli ECOR38 0.93 HEPCGN_09575 uxuA mannonate dehydratase 0.73 HEPCGN_03035 wcaE colanic acid biosynthesis glycosyltransferase WcaE low > 87
Escherichia coli ECRC100 0.93 OKFHMN_11565 uxuA mannonate dehydratase 0.74 OKFHMN_24335 wcaE colanic acid biosynthesis glycosyltransferase WcaE — —
Escherichia coli ECRC99 0.93 KEDOAH_16580 uxuA mannonate dehydratase 0.74 KEDOAH_03815 wcaE colanic acid biosynthesis glycosyltransferase WcaE — —
Enterobacter asburiae PDN3 0.78 EX28DRAFT_0390 mannonate dehydratase 0.87 EX28DRAFT_0500 colanic acid biosynthesis glycosyl transferase WcaE low > 76
Enterobacter sp. TBS_079 0.77 MPMX20_03137 Mannonate dehydratase 0.86 MPMX20_03037 hypothetical protein low > 85
Pectobacterium carotovorum WPP14 0.76 HER17_RS16140 mannonate dehydratase 0.13 HER17_RS14520 glycosyltransferase low > 75
Bacteroides ovatus ATCC 8483 0.65 BACOVA_00858 mannonate dehydratase 0.19 BACOVA_02192 glycosyltransferase, group 2 family protein low > 94
Parabacteroides merdae CL09T00C40 0.64 HMPREF1078_RS13635 mannonate dehydratase 0.17 HMPREF1078_RS17540 glycosyltransferase family 2 protein low > 61
Bacteroides stercoris CC31F 0.63 HMPREF1181_RS02210 mannonate dehydratase 0.19 HMPREF1181_RS01325 glycosyltransferase low > 56
Mucilaginibacter yixingensis YX-36 DSM 26809 0.63 ABZR88_RS00290 mannonate dehydratase 0.21 ABZR88_RS22135 glycosyltransferase family 2 protein — —
Azospirillum brasilense Sp245 0.54 AZOBR_RS31370 mannonate dehydratase 0.19 AZOBR_RS08155 hypothetical protein low > 97
Pedobacter sp. GW460-11-11-14-LB5 0.54 CA265_RS07225 mannonate dehydratase 0.20 CA265_RS23780 glycosyl transferase — —

Not shown: 22 genomes with orthologs for GFF3093 only; 3 genomes with orthologs for GFF3873 only