Conservation of cofitness between GFF4567 and GFF3437 in Sphingobium sp. HT1-2

21 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Sphingobium sp. HT1-2 1.0 GFF4567 hypothetical membrane associated protein 1.0 GFF3437 Transcriptional regulator, AraC family 0.80 5
Pseudomonas fluorescens SBW25 0.28 PFLU_RS25580 YfiR family protein 0.39 PFLU_RS12030 helix-turn-helix transcriptional regulator low > 109
Pseudomonas fluorescens SBW25-INTG 0.28 PFLU_RS25580 YfiR family protein 0.39 PFLU_RS12030 helix-turn-helix transcriptional regulator low > 109
Pseudomonas lactucae CFBP13502 0.27 GEMAOFIL_04899 hypothetical protein 0.37 GEMAOFIL_03501 HTH-type transcriptional regulator NimR low > 96
Pseudomonas fluorescens FW300-N2E2 0.27 Pf6N2E2_3457 Uncharacterized protein YfiR precursor 0.49 Pf6N2E2_5650 Transcriptional regulator, AraC family low > 103
Pseudomonas orientalis W4I3 0.26 QF045_RS26000 YfiR family protein 0.34 QF045_RS24555 helix-turn-helix transcriptional regulator low > 93
Pantoea sp. MT58 0.24 IAI47_20480 YfiR family protein 0.35 IAI47_10240 helix-turn-helix transcriptional regulator low > 76
Klebsiella michiganensis M5al 0.22 BWI76_RS21485 DUF4154 domain-containing protein 0.45 BWI76_RS05880 AraC-type DNA-binding domain-containing protein low > 92
Escherichia coli ECOR38 0.21 HEPCGN_20325 yfiR Protein YfiR 0.26 HEPCGN_05070 nimR DNA-binding transcriptional regulator NimR low > 88
Escherichia coli ECRC62 0.21 BNILDI_11685 yfiR Protein YfiR 0.26 BNILDI_15995 nimR DNA-binding transcriptional regulator NimR low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 0.21 OHPLBJKB_01103 hypothetical protein 0.26 OHPLBJKB_01943 HTH-type transcriptional regulator NimR low > 74
Escherichia coli ECRC101 0.21 MCAODC_11735 yfiR Protein YfiR 0.26 MCAODC_18730 nimR DNA-binding transcriptional regulator NimR low > 87
Escherichia coli ECOR27 0.21 NOLOHH_12880 yfiR Protein YfiR 0.26 NOLOHH_17210 nimR DNA-binding transcriptional regulator NimR low > 76
Escherichia coli BW25113 0.21 b2603 yfiR hypothetical protein (NCBI) 0.26 b1790 yeaM predicted DNA-binding transcriptional regulator (NCBI) low > 76
Escherichia coli ECRC98 0.21 JDDGAC_24870 yfiR Protein YfiR 0.26 JDDGAC_01255 nimR DNA-binding transcriptional regulator NimR low > 87
Escherichia coli ECRC99 0.21 KEDOAH_07015 yfiR Protein YfiR 0.26 KEDOAH_01430 nimR DNA-binding transcriptional regulator NimR
Escherichia coli BL21 0.21 ECD_02492 putative periplasmic inhibitor of YfiN activity 0.26 ECD_01759 putative DNA-binding transcriptional regulator
Escherichia coli ECRC102 0.21 NIAGMN_18975 yfiR Protein YfiR 0.26 NIAGMN_01385 nimR DNA-binding transcriptional regulator NimR low > 80
Escherichia coli ECRC100 0.21 OKFHMN_21205 yfiR Protein YfiR 0.26 OKFHMN_26680 nimR DNA-binding transcriptional regulator NimR low > 79
Escherichia coli Nissle 1917 0.21 ECOLIN_RS14715 YfiR family protein 0.27 ECOLIN_RS08025 helix-turn-helix transcriptional regulator
Escherichia fergusonii Becca 0.21 EFB2_01289 hypothetical protein 0.27 EFB2_02591 HTH-type transcriptional regulator NimR low > 86
Acinetobacter baumannii LAC-4 0.19 RR41_RS02640 YfiR family protein 0.40 RR41_RS13340 helix-turn-helix transcriptional regulator low > 55

Not shown: 0 genomes with orthologs for GFF4567 only; 56 genomes with orthologs for GFF3437 only