Conservation of cofitness between GFF4282 and GFF3257 in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

21 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 1.0 GFF4282 Protein YaiC 1.0 GFF3257 hemimethylated DNA binding protein YccV 0.53 5
Escherichia coli BW25113 0.78 b0385 yaiC predicted diguanylate cyclase (NCBI) 0.93 b0966 hspQ DNA-binding protein, hemimethylated (RefSeq) low > 76
Escherichia coli Nissle 1917 0.78 ECOLIN_RS02340 diguanylate cyclase AdrA 0.93 ECOLIN_RS05080 heat shock protein HspQ low > 55
Escherichia coli BL21 0.78 ECD_00332 diguanylate cyclase, cellulose regualtor 0.93 ECD_00970 heat shock protein involved in degradation of mutant DnaA; hemimethylated oriC DNA-binding protein low > 61
Escherichia coli ECOR38 0.78 HEPCGN_07255 adrA diguanylate cyclase AdrA 0.93 HEPCGN_23330 hspQ heat shock protein HspQ low > 87
Escherichia coli ECRC101 0.78 MCAODC_27840 adrA diguanylate cyclase AdrA 0.93 MCAODC_24580 hspQ heat shock protein HspQ low > 87
Escherichia coli ECRC102 0.78 NIAGMN_06670 adrA diguanylate cyclase AdrA 0.93 NIAGMN_02910 hspQ heat shock protein HspQ
Escherichia coli ECRC100 0.78 OKFHMN_08615 adrA diguanylate cyclase AdrA 0.93 OKFHMN_05190 hspQ heat shock protein HspQ low > 80
Escherichia coli ECRC98 0.78 JDDGAC_12270 adrA diguanylate cyclase AdrA 0.93 JDDGAC_08800 hspQ heat shock protein HspQ low > 86
Escherichia coli ECRC99 0.78 KEDOAH_19350 adrA diguanylate cyclase AdrA 0.93 KEDOAH_22545 hspQ heat shock protein HspQ
Escherichia fergusonii Becca 0.78 EFB2_03671 putative diguanylate cyclase DgcC 0.93 EFB2_03105 Heat shock protein HspQ low > 86
Escherichia coli HS(pFamp)R (ATCC 700891) 0.78 OHPLBJKB_03289 putative diguanylate cyclase DgcC 0.93 OHPLBJKB_02700 Heat shock protein HspQ low > 73
Escherichia coli ECOR27 0.78 NOLOHH_01540 adrA diguanylate cyclase AdrA 0.93 NOLOHH_21745 hspQ heat shock protein HspQ low > 75
Escherichia coli ECRC62 0.77 BNILDI_22955 adrA diguanylate cyclase AdrA 0.93 BNILDI_19910 hspQ heat shock protein HspQ low > 75
Enterobacter sp. TBS_079 0.64 MPMX20_00975 putative diguanylate cyclase DgcC 0.93 MPMX20_01616 Heat shock protein HspQ low > 85
Enterobacter asburiae PDN3 0.63 EX28DRAFT_2586 diguanylate cyclase (GGDEF) domain 0.92 EX28DRAFT_1977 hemimethylated DNA binding domain low > 76
Pectobacterium carotovorum WPP14 0.45 HER17_RS14460 diguanylate cyclase AdrA 0.61 HER17_RS08465 heat shock protein HspQ low > 75
Serratia liquefaciens MT49 0.44 IAI46_05890 diguanylate cyclase 0.82 IAI46_08920 heat shock protein HspQ low > 86
Dickeya dadantii 3937 0.40 DDA3937_RS06830 diguanylate cyclase 0.64 DDA3937_RS15200 heat shock protein HspQ low > 74
Pantoea sp. MT58 0.24 IAI47_19665 diguanylate cyclase 0.71 IAI47_12600 heat shock protein HspQ low > 76
Klebsiella michiganensis M5al 0.21 BWI76_RS21800 MASE2 domain/diguanylate cyclase 0.89 BWI76_RS10040 heat-shock protein HspQ low > 92
Rahnella sp. WP5 0.19 EX31_RS22990 diguanylate cyclase 0.72 EX31_RS17995 heat shock protein HspQ low > 89

Not shown: 15 genomes with orthologs for GFF4282 only; 3 genomes with orthologs for GFF3257 only