Conservation of cofitness between GFF3239 and GFF3257 in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

23 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 1.0 GFF3239 23S rRNA (guanine-N-2-) -methyltransferase rlmL EC 2.1.1.-) 1.0 GFF3257 hemimethylated DNA binding protein YccV 0.58 14
Escherichia coli ECOR38 0.92 HEPCGN_23240 rlmKL bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL 0.93 HEPCGN_23330 hspQ heat shock protein HspQ low > 87
Escherichia coli BL21 0.92 ECD_00952 23S rRNA m(2)G2445 and m(7)G2069 methyltransferases, SAM-dependent 0.93 ECD_00970 heat shock protein involved in degradation of mutant DnaA; hemimethylated oriC DNA-binding protein 0.28 60
Escherichia coli BW25113 0.92 b0948 ycbY predicted methyltransferase (NCBI) 0.93 b0966 hspQ DNA-binding protein, hemimethylated (RefSeq) low > 76
Escherichia coli HS(pFamp)R (ATCC 700891) 0.92 OHPLBJKB_02718 Ribosomal RNA large subunit methyltransferase K/L 0.93 OHPLBJKB_02700 Heat shock protein HspQ low > 73
Escherichia coli ECRC101 0.92 MCAODC_24670 rlmKL bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL 0.93 MCAODC_24580 hspQ heat shock protein HspQ low > 87
Escherichia coli ECRC99 0.92 KEDOAH_22455 rlmKL bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL 0.93 KEDOAH_22545 hspQ heat shock protein HspQ — —
Escherichia coli ECRC100 0.92 OKFHMN_05280 rlmKL bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL 0.93 OKFHMN_05190 hspQ heat shock protein HspQ low > 80
Escherichia coli ECRC102 0.92 NIAGMN_03000 rlmKL bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL 0.93 NIAGMN_02910 hspQ heat shock protein HspQ — —
Escherichia coli ECRC62 0.92 BNILDI_20000 rlmKL bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL 0.93 BNILDI_19910 hspQ heat shock protein HspQ low > 75
Escherichia coli ECOR27 0.92 NOLOHH_21835 rlmKL bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL 0.93 NOLOHH_21745 hspQ heat shock protein HspQ low > 75
Escherichia fergusonii Becca 0.92 EFB2_03123 Ribosomal RNA large subunit methyltransferase K/L 0.93 EFB2_03105 Heat shock protein HspQ low > 86
Escherichia coli Nissle 1917 0.92 ECOLIN_RS04980 bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL 0.93 ECOLIN_RS05080 heat shock protein HspQ low > 55
Escherichia coli ECRC98 0.92 JDDGAC_08890 rlmKL bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL 0.93 JDDGAC_08800 hspQ heat shock protein HspQ low > 86
Enterobacter sp. TBS_079 0.88 MPMX20_01599 Ribosomal RNA large subunit methyltransferase K/L 0.93 MPMX20_01616 Heat shock protein HspQ low > 85
Enterobacter asburiae PDN3 0.88 EX28DRAFT_1995 Predicted N6-adenine-specific DNA methylase 0.92 EX28DRAFT_1977 hemimethylated DNA binding domain low > 76
Klebsiella michiganensis M5al 0.87 BWI76_RS09925 23S rRNA (guanine(2445)-N(2))/(guanine(2069)-N(7))- methyltransferase 0.89 BWI76_RS10040 heat-shock protein HspQ low > 92
Pectobacterium carotovorum WPP14 0.78 HER17_RS11990 bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL 0.61 HER17_RS08465 heat shock protein HspQ low > 75
Serratia liquefaciens MT49 0.78 IAI46_08820 bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL 0.82 IAI46_08920 heat shock protein HspQ low > 86
Dickeya dadantii 3937 0.77 DDA3937_RS12840 bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL 0.64 DDA3937_RS15200 heat shock protein HspQ low > 74
Rahnella sp. WP5 0.77 EX31_RS18080 bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL 0.72 EX31_RS17995 heat shock protein HspQ low > 89
Dickeya dianthicola ME23 0.77 DZA65_RS13375 bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL 0.64 DZA65_RS16100 heat shock protein HspQ low > 75
Dickeya dianthicola 67-19 0.77 HGI48_RS12910 bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL 0.64 HGI48_RS15275 heat shock protein HspQ low > 71
Pantoea sp. MT58 0.76 IAI47_12690 bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL 0.71 IAI47_12600 heat shock protein HspQ low > 76

Not shown: 30 genomes with orthologs for GFF3239 only; 1 genomes with orthologs for GFF3257 only