Conservation of cofitness between PS417_07120 and PS417_13780 in Pseudomonas simiae WCS417
10 genomes with putative orthologs of both genes
Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
Pseudomonas simiae WCS417 | 1.0 | PS417_07120 | | RNA polymerase sigma-H factor | 1.0 | PS417_13780 | | integrase | 0.37 | 10 |
Pseudomonas fluorescens FW300-N1B4 | 1.00 | Pf1N1B4_3323 | | RNA polymerase sigma-H factor AlgT | 0.87 | Pf1N1B4_4812 | | Site-specific recombinase, phage integrase family | — | — |
Pseudomonas fluorescens SBW25-INTG | 1.00 | PFLU_RS07230 | | RNA polymerase sigma factor RpoE | 0.98 | PFLU_RS14840 | | tyrosine-type recombinase/integrase | low | > 109 |
Pseudomonas fluorescens GW456-L13 | 1.00 | PfGW456L13_4516 | | RNA polymerase sigma-H factor AlgT | 0.86 | PfGW456L13_3231 | | Site-specific recombinase, phage integrase family | low | > 87 |
Pseudomonas fluorescens SBW25 | 1.00 | PFLU_RS07230 | | RNA polymerase sigma factor RpoE | 0.98 | PFLU_RS14840 | | tyrosine-type recombinase/integrase | low | > 109 |
Pseudomonas putida KT2440 | 0.99 | PP_1427 | | RNA polymerase sigma E factor | 0.73 | PP_2841 | | Site-specific recombinase, phage integrase family | low | > 96 |
Pseudomonas syringae pv. syringae B728a | 0.97 | Psyr_3958 | | RNA polymerase, sigma-24 subunit, RpoE | 0.76 | Psyr_2751 | | Phage integrase:Phage integrase, N-terminal SAM-like protein | low | > 86 |
Pseudomonas syringae pv. syringae B728a ΔmexB | 0.97 | Psyr_3958 | | RNA polymerase, sigma-24 subunit, RpoE | 0.76 | Psyr_2751 | | Phage integrase:Phage integrase, N-terminal SAM-like protein | low | > 86 |
Shewanella oneidensis MR-1 | 0.72 | SO1342 | rpoE | RNA polymerase sigma-24 factor (NCBI ptt file) | 0.16 | SO3884 | | site-specific recombinase, phage integrase family (NCBI ptt file) | — | — |
Alteromonas macleodii MIT1002 | 0.71 | MIT1002_02719 | | Sigma-24 | 0.20 | MIT1002_03221 | | Tyrosine recombinase XerC | — | — |
Enterobacter sp. TBS_079 | 0.65 | MPMX20_03444 | | ECF RNA polymerase sigma-E factor | 0.29 | MPMX20_04667 | | Tyrosine recombinase XerC | — | — |
Not shown: 73 genomes with orthologs for PS417_07120 only; 0 genomes with orthologs for PS417_13780 only