Conservation of cofitness between GFF4366 and GFF2133 in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

24 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 1.0 GFF4366 putative multidrug transporter membrane ATP-binding components 1.0 GFF2133 RNase E specificity factor CsrD 0.91 5
Enterobacter asburiae PDN3 0.88 EX28DRAFT_2520 ABC-type multidrug transport system, ATPase and permease components 0.80 EX28DRAFT_3302 diguanylate cyclase (GGDEF) domain low > 76
Escherichia coli BL21 0.88 ECD_00401 putative multidrug ABC transporter ATPase 0.86 ECD_03111 targeting factor for csrBC sRNA degradation low > 61
Escherichia coli ECRC101 0.87 MCAODC_27495 mdlB SmdB family multidrug efflux ABC transporter permease/ATP-binding protein 0.86 MCAODC_08240 csrD RNase E specificity factor CsrD low > 87
Escherichia coli BW25113 0.87 b0449 mdlB fused predicted multidrug transporter subunits of ABC superfamily: ATP-binding components (NCBI) 0.86 b3252 yhdA conserved inner membrane protein (NCBI) low > 76
Escherichia coli ECRC100 0.87 OKFHMN_08270 mdlB SmdB family multidrug efflux ABC transporter permease/ATP-binding protein 0.86 OKFHMN_17720 csrD RNase E specificity factor CsrD low > 80
Escherichia coli ECRC99 0.87 KEDOAH_19695 mdlB SmdB family multidrug efflux ABC transporter permease/ATP-binding protein 0.86 KEDOAH_10430 csrD RNase E specificity factor CsrD — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.87 OHPLBJKB_03224 Multidrug resistance-like ATP-binding protein MdlB 0.86 OHPLBJKB_00453 RNase E specificity factor CsrD low > 73
Escherichia coli ECRC102 0.87 NIAGMN_06325 mdlB SmdB family multidrug efflux ABC transporter permease/ATP-binding protein 0.86 NIAGMN_15480 csrD RNase E specificity factor CsrD — —
Escherichia coli ECRC98 0.87 JDDGAC_11925 mdlB SmdB family multidrug efflux ABC transporter permease/ATP-binding protein 0.86 JDDGAC_21345 csrD RNase E specificity factor CsrD low > 86
Escherichia coli Nissle 1917 0.87 ECOLIN_RS02690 SmdB family multidrug efflux ABC transporter permease/ATP-binding protein 0.86 ECOLIN_RS18635 RNase E specificity factor CsrD low > 55
Escherichia coli ECOR27 0.87 NOLOHH_01205 mdlB SmdB family multidrug efflux ABC transporter permease/ATP-binding protein 0.86 NOLOHH_09505 csrD RNase E specificity factor CsrD low > 75
Escherichia fergusonii Becca 0.87 EFB2_03608 Multidrug resistance-like ATP-binding protein MdlB 0.86 EFB2_00579 RNase E specificity factor CsrD low > 86
Escherichia coli ECRC62 0.87 BNILDI_22620 mdlB SmdB family multidrug efflux ABC transporter permease/ATP-binding protein 0.86 BNILDI_02015 csrD RNase E specificity factor CsrD low > 75
Escherichia coli ECOR38 0.87 HEPCGN_06885 mdlB SmdB family multidrug efflux ABC transporter permease/ATP-binding protein 0.86 HEPCGN_16585 csrD RNase E specificity factor CsrD low > 87
Enterobacter sp. TBS_079 0.86 MPMX20_01041 Multidrug resistance-like ATP-binding protein MdlB 0.80 MPMX20_04158 RNase E specificity factor CsrD low > 85
Klebsiella michiganensis M5al 0.85 BWI76_RS06590 multidrug ABC transporter permease/ATP-binding protein 0.78 BWI76_RS25505 RNase E specificity factor CsrD low > 92
Serratia liquefaciens MT49 0.80 IAI46_05075 SmdB family multidrug efflux ABC transporter permease/ATP-binding protein 0.56 IAI46_22725 RNase E specificity factor CsrD low > 86
Pantoea sp. MT58 0.78 IAI47_14590 SmdB family multidrug efflux ABC transporter permease/ATP-binding protein 0.50 IAI47_02430 RNase E specificity factor CsrD low > 76
Erwinia tracheiphila SCR3 0.77 LU632_RS18280 SmdB family multidrug efflux ABC transporter permease/ATP-binding protein 0.51 LU632_RS21455 csrD RNase E specificity factor CsrD low > 74
Pectobacterium carotovorum WPP14 0.76 HER17_RS15795 SmdB family multidrug efflux ABC transporter permease/ATP-binding protein 0.52 HER17_RS20175 RNase E specificity factor CsrD low > 75
Rahnella sp. WP5 0.74 EX31_RS22310 SmdB family multidrug efflux ABC transporter permease/ATP-binding protein 0.49 EX31_RS12230 RNase E specificity factor CsrD low > 89
Dickeya dianthicola ME23 0.73 DZA65_RS06060 SmdB family multidrug efflux ABC transporter permease/ATP-binding protein 0.51 DZA65_RS01405 RNase E specificity factor CsrD low > 75
Dickeya dianthicola 67-19 0.71 HGI48_RS05735 SmdB family multidrug efflux ABC transporter permease/ATP-binding protein 0.51 HGI48_RS01345 RNase E specificity factor CsrD low > 71
Dickeya dadantii 3937 0.71 DDA3937_RS05690 SmdB family multidrug efflux ABC transporter permease/ATP-binding protein 0.51 DDA3937_RS01425 RNase E specificity factor CsrD low > 74

Not shown: 1 genomes with orthologs for GFF4366 only; 11 genomes with orthologs for GFF2133 only